Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

The Human Microbiome Project (HMP) aims to characterize the microbial communities of 18 body sites from healthy individuals. To accomplish this, the HMP generated two types of shotgun data: reference shotgun sequences isolated from different anatomical sites on the human body and shotgun metagenomic...

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Hlavní autoři: Martin, John, Sykes, Sean, Young, Sarah, Kota, Karthik, Sanka, Ravi, Sheth, Nihar, Orvis, Joshua, Sodergren, Erica, Wang, Zhengyuan, Weinstock, George M., Mitreva, Makedonka
Médium: Artigo
Jazyk:Inglês
Vydáno: Public Library of Science 2012
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Research Article
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3374613/
https://ncbi.nlm.nih.gov/pubmed/22719831
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0036427
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