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Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

The Human Microbiome Project (HMP) aims to characterize the microbial communities of 18 body sites from healthy individuals. To accomplish this, the HMP generated two types of shotgun data: reference shotgun sequences isolated from different anatomical sites on the human body and shotgun metagenomic...

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Détails bibliographiques
Auteurs principaux: Martin, John, Sykes, Sean, Young, Sarah, Kota, Karthik, Sanka, Ravi, Sheth, Nihar, Orvis, Joshua, Sodergren, Erica, Wang, Zhengyuan, Weinstock, George M., Mitreva, Makedonka
Format: Artigo
Langue:Inglês
Publié: Public Library of Science 2012
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3374613/
https://ncbi.nlm.nih.gov/pubmed/22719831
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0036427
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