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Locating binding poses in protein-ligand systems using reconnaissance metadynamics

A molecular dynamics-based protocol is proposed for finding and scoring protein-ligand binding poses. This protocol uses the recently developed reconnaissance metadynamics method, which employs a self-learning algorithm to construct a bias that pushes the system away from the kinetic traps where it...

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Detalhes bibliográficos
Main Authors: Söderhjelm, Pär, Tribello, Gareth A., Parrinello, Michele
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3325676/
https://ncbi.nlm.nih.gov/pubmed/22440749
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.1201940109
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