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Multiple pH Regime Molecular Dynamics Simulation for pK Calculations

Ionisation equilibria in proteins are influenced by conformational flexibility, which can in principle be accounted for by molecular dynamics simulation. One problem in this method is the bias arising from the fixed protonation state during the simulation. Its effect is mostly exhibited when the ion...

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Detalhes bibliográficos
Main Authors: Nilsson, Lennart, Karshikoff, Andrey
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3103538/
https://ncbi.nlm.nih.gov/pubmed/21647418
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0020116
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