Simrank: Rapid and sensitive general-purpose k-mer search tool

BACKGROUND: Terabyte-scale collections of string-encoded data are expected from consortia efforts such as the Human Microbiome Project http://nihroadmap.nih.gov/hmp. Intra- and inter-project data similarity searches are enabled by rapid k-mer matching strategies. Software applications for sequence d...

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Bibliografiska uppgifter
Huvudupphovsmän: DeSantis, Todd Z, Keller, Keith, Karaoz, Ulas, Alekseyenko, Alexander V, Singh, Navjeet NS, Brodie, Eoin L, Pei, Zhiheng, Andersen, Gary L, Larsen, Niels
Materialtyp: Artigo
Språk:Inglês
Publicerad: BioMed Central 2011
Ämnen:
Software
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC3097142/
https://ncbi.nlm.nih.gov/pubmed/21524302
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1472-6785-11-11
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