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Reparameterization of RNA χ Torsion Parameters for the AMBER Force Field and Comparison to NMR Spectra for Cytidine and Uridine
A reparameterization of the torsional parameters for the glycosidic dihedral angle, χ, for the AMBER99 force field in RNA nucleosides is used to provide a modified force field, AMBER99χ. Molecular dynamics simulations of cytidine, uridine, adenosine, and guanosine in aqueous solution using the AMBER...
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| Hauptverfasser: | , , , , |
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| Format: | Artigo |
| Sprache: | Inglês |
| Veröffentlicht: |
American Chemical Society
2010
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| Online Zugang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2867398/ https://ncbi.nlm.nih.gov/pubmed/20463845 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct900604a |
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