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A Bayesian hidden Markov model for motif discovery through joint modeling of genomic sequence and ChIP-chip data

We propose a unified framework for the analysis of Chromatin (Ch) Immunoprecipitation (IP) microarray (ChIP-chip) data for detecting transcription factor binding sites (TFBSs) or motifs. ChIP-chip assays are used to focus the genome-wide search for TFBSs by isolating a sample of DNA fragments with T...

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Autors principals: Gelfond, Jonathan A. L., Gupta, Mayetri, Ibrahim, Joseph G.
Format: Artigo
Idioma:Inglês
Publicat: 2009
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC2794970/
https://ncbi.nlm.nih.gov/pubmed/19210737
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1111/j.1541-0420.2008.01180.x
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