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Error and efficiency of replica exchange molecular dynamics simulations

We derive simple analytical expressions for the error and computational efficiency of replica exchange molecular dynamics (REMD) simulations (and by analogy replica exchange Monte Carlo simulations). The theory applies to the important case of systems whose dynamics at long times is dominated by the...

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Bibliografiske detaljer
Main Authors: Rosta, Edina, Hummer, Gerhard
Format: Artigo
Sprog:Inglês
Udgivet: U.S. Government 2009
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2780465/
https://ncbi.nlm.nih.gov/pubmed/19894977
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.3249608
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