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Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data

With the advent of ultra high-throughput sequencing technologies, increasingly researchers are turning to deep sequencing for gene expression studies. Here we present a set of rigorous methods for normalization, quantification of noise, and co-expression analysis of deep sequencing data. Using these...

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Detalhes bibliográficos
Main Authors: Balwierz, Piotr J, Carninci, Piero, Daub, Carsten O, Kawai, Jun, Hayashizaki, Yoshihide, Van Belle, Werner, Beisel, Christian, van Nimwegen, Erik
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2728533/
https://ncbi.nlm.nih.gov/pubmed/19624849
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2009-10-7-r79
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