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Parallel short sequence assembly of transcriptomes

BACKGROUND: The de novo assembly of genomes and transcriptomes from short sequences is a challenging problem. Because of the high coverage needed to assemble short sequences as well as the overhead of modeling the assembly problem as a graph problem, the methods for short sequence assembly are often...

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Detalhes bibliográficos
Main Authors: Jackson, Benjamin G, Schnable, Patrick S, Aluru, Srinivas
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2648799/
https://ncbi.nlm.nih.gov/pubmed/19208113
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S14
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