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Finding optimal threshold for correction error reads in DNA assembling

BACKGROUND: DNA assembling is the problem of determining the nucleotide sequence of a genome from its substrings, called reads. In the experiments, there may be some errors on the reads which affect the performance of the DNA assembly algorithms. Existing algorithms, e.g. ECINDEL and SRCorr, correct...

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Détails bibliographiques
Auteurs principaux: Chin, Francis YL, Leung, Henry CM, Li, Wei-Lin, Yiu, Siu-Ming
Format: Artigo
Langue:Inglês
Publié: BioMed Central 2009
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC2648749/
https://ncbi.nlm.nih.gov/pubmed/19208114
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S15
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