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Finding optimal threshold for correction error reads in DNA assembling

BACKGROUND: DNA assembling is the problem of determining the nucleotide sequence of a genome from its substrings, called reads. In the experiments, there may be some errors on the reads which affect the performance of the DNA assembly algorithms. Existing algorithms, e.g. ECINDEL and SRCorr, correct...

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Detalhes bibliográficos
Main Authors: Chin, Francis YL, Leung, Henry CM, Li, Wei-Lin, Yiu, Siu-Ming
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2648749/
https://ncbi.nlm.nih.gov/pubmed/19208114
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S15
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