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Loop modeling: Sampling, filtering, and scoring

We describe a fast and accurate protocol, LoopBuilder, for the prediction of loop conformations in proteins. The procedure includes extensive sampling of backbone conformations, side chain addition, the use of a statistical potential to select a subset of these conformations, and, finally, an energy...

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Detalhes bibliográficos
Main Authors: Soto, Cinque S, Fasnacht, Marc, Zhu, Jiang, Forrest, Lucy, Honig, Barry
Formato: Artigo
Idioma:Inglês
Publicado em: Wiley Subscription Services, Inc., A Wiley Company 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2553011/
https://ncbi.nlm.nih.gov/pubmed/17729286
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/prot.21612
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