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Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm

We present a general-purpose model for biomolecular simulations at the molecular level that incorporates stochasticity, spatial dependence, and volume exclusion, using diffusing and reacting particles with physical dimensions. To validate the model, we first established the formal relationship betwe...

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Detalhes bibliográficos
Main Authors: Ridgway, Douglas, Broderick, Gordon, Lopez-Campistrous, Ana, Ru'aini, Melania, Winter, Philip, Hamilton, Matthew, Boulanger, Pierre, Kovalenko, Andriy, Ellison, Michael J.
Formato: Artigo
Idioma:Inglês
Publicado em: The Biophysical Society 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2367169/
https://ncbi.nlm.nih.gov/pubmed/18234819
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1529/biophysj.107.116053
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