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A One-Dimensional Reaction Coordinate for Identification of Transition States from Explicit Solvent P(fold)-Like Calculations

A properly identified transition state ensemble (TSE) in a molecular dynamics (MD) simulation can reveal a tremendous amount about how a protein folds and offer a point of comparison to experimentally derived Φ(F) values, which reflect the degree of structure in these transient states. In one such m...

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Bibliografiske detaljer
Main Authors: Beck, David A. C., Daggett, Valerie
Format: Artigo
Sprog:Inglês
Udgivet: The Biophysical Society 2007
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2072083/
https://ncbi.nlm.nih.gov/pubmed/17978165
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1529/biophysj.106.100149
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