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Predicting helical coaxial stacking in RNA multibranch loops

The hypothesis that RNA coaxial stacking can be predicted by free energy minimization using nearest-neighbor parameters is tested. The results show 58.2% positive predictive value (PPV) and 65.7% sensitivity for accuracy of the lowest free energy configuration compared with crystal structures. The p...

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Autors principals: Tyagi, Rahul, Mathews, David H.
Format: Artigo
Idioma:Inglês
Publicat: Cold Spring Harbor Laboratory Press 2007
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC1894924/
https://ncbi.nlm.nih.gov/pubmed/17507661
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.305307
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