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Kappa-alpha plot derived structural alphabet and BLOSUM-like substitution matrix for rapid search of protein structure database

We present a novel protein structure database search tool, 3D-BLAST, that is useful for analyzing novel structures and can return a ranked list of alignments. This tool has the features of BLAST (for example, robust statistical basis, and effective and reliable search capabilities) and employs a kap...

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Autors principals: Tung, Chi-Hua, Huang, Jhang-Wei, Yang, Jinn-Moon
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2007
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC1868941/
https://ncbi.nlm.nih.gov/pubmed/17335583
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2007-8-3-r31
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