Spotless, a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics

Spatial transcriptomics (ST) technologies allow the profiling of the transcriptome of cells while keeping their spatial context. Since most commercial untargeted ST technologies do not yet operate at single-cell resolution, computational methods such as deconvolution are often used to infer the cell...

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Dades bibliogràfiques

Autors principals:	Chananchida Sang-aram, Robin Browaeys, Ruth Seurinck, Yvan Saeys
Format:	Artigo
Idioma:	Inglês
Publicat:	eLife Sciences Publications Ltd 2024-05-01
Col·lecció:	eLife
Matèries:	spatial transcriptomics deconvolution benchmark single-cell RNA sequencing
Accés en línia:	https://elifesciences.org/articles/88431
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