MOLGENIS/OMX for multi-omics and personalized medicine

Por Swertz, Morris, van der Velde, K Joeri
Publicado no J Clin Bioinforma (2015)

BiobankConnect: software to rapidly connect data elements for pooled analysis across biobanks using ontological and lexical indexing

Por Pang, Chao, Hendriksen, Dennis, Dijkstra, Martijn, van der Velde, K Joeri, Kuiper, Joel, Hillege, Hans L, Swertz, Morris A
Publicado no J Am Med Inform Assoc (2015)

xQTL workbench: a scalable web environment for multi-level QTL analysis

Por Arends, Danny, van der Velde, K. Joeri, Prins, Pjotr, Broman, Karl W., Möller, Steffen, Jansen, Ritsert C., Swertz, Morris A.
Publicado em 2012

Genotype harmonizer: automatic strand alignment and format conversion for genotype data integration

Por Deelen, Patrick, Bonder, Marc Jan, van der Velde, K Joeri, Westra, Harm-Jan, Winder, Erwin, Hendriksen, Dennis, Franke, Lude, Swertz, Morris A
Publicado no BMC Res Notes (2014)

Global Genetic Robustness of the Alternative Splicing Machinery in Caenorhabditis elegans

Por Li, Yang, Breitling, Rainer, Snoek, L. Basten, van der Velde, K. Joeri, Swertz, Morris A., Riksen, Joost, Jansen, Ritsert C., Kammenga, Jan E.
Publicado em 2010

Bioinformatics tools and database resources for systems genetics analysis in mice—a short review and an evaluation of future needs

Por Durrant, Caroline, Swertz, Morris A., Alberts, Rudi, Arends, Danny, Möller, Steffen, Mott, Richard, Prins, Pjotr, van der Velde, K. Joeri, Jansen, Ritsert C., Schughart, Klaus
Publicado em 2012

WormQTL(HD)—a web database for linking human disease to natural variation data in C. elegans

Por van der Velde, K. Joeri, de Haan, Mark, Zych, Konrad, Arends, Danny, Snoek, L. Basten, Kammenga, Jan E., Jansen, Ritsert C., Swertz, Morris A., Li, Yang
Publicado em 2014

reGenotyper: Detecting mislabeled samples in genetic data

Por Zych, Konrad, Snoek, Basten L., Elvin, Mark, Rodriguez, Miriam, Van der Velde, K. Joeri, Arends, Danny, Westra, Harm-Jan, Swertz, Morris A., Poulin, Gino, Kammenga, Jan E., Breitling, Rainer, Jansen, Ritsert C., Li, Yang
Publicado no PLoS One (2017)

MOLGENIS/connect: a system for semi-automatic integration of heterogeneous phenotype data with applications in biobanks

Por Pang, Chao, van Enckevort, David, de Haan, Mark, Kelpin, Fleur, Jetten, Jonathan, Hendriksen, Dennis, de Boer, Tommy, Charbon, Bart, Winder, Erwin, van der Velde, K. Joeri, Doiron, Dany, Fortier, Isabel, Hillege, Hans, Swertz, Morris A.
Publicado no Bioinformatics (2016)

Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels

Por Deelen, Patrick, Zhernakova, Daria V, de Haan, Mark, van der Sijde, Marijke, Bonder, Marc Jan, Karjalainen, Juha, van der Velde, K Joeri, Abbott, Kristin M, Fu, Jingyuan, Wijmenga, Cisca, Sinke, Richard J, Swertz, Morris A, Franke, Lude
Publicado no Genome Med (2015)

GAVIN: Gene-Aware Variant INterpretation for medical sequencing

Por van der Velde, K. Joeri, de Boer, Eddy N., van Diemen, Cleo C., Sikkema-Raddatz, Birgit, Abbott, Kristin M., Knopperts, Alain, Franke, Lude, Sijmons, Rolf H., de Koning, Tom J., Wijmenga, Cisca, Sinke, Richard J., Swertz, Morris A.
Publicado no Genome Biol (2017)

WormQTL—public archive and analysis web portal for natural variation data in Caenorhabditis spp

Por Snoek, L. Basten, Van der Velde, K. Joeri, Arends, Danny, Li, Yang, Beyer, Antje, Elvin, Mark, Fisher, Jasmin, Hajnal, Alex, Hengartner, Michael O., Poulin, Gino B., Rodriguez, Miriam, Schmid, Tobias, Schrimpf, Sabine, Xue, Feng, Jansen, Ritsert C., Kammenga, Jan E., Swertz, Morris A.
Publicado em 2013

Evaluation of CADD Scores in Curated Mismatch Repair Gene Variants Yields a Model for Clinical Validation and Prioritization

Por van der Velde, K. Joeri, Kuiper, Joël, Thompson, Bryony A., Plazzer, John‐Paul, van Valkenhoef, Gert, de Haan, Mark, Jongbloed, Jan D.H., Wijmenga, Cisca, de Koning, Tom J., Abbott, Kristin M., Sinke, Richard, Spurdle, Amanda B., Macrae, Finlay, Genuardi, Maurizio, Sijmons, Rolf H., Swertz, Morris A.
Publicado no Hum Mutat (2015)