Effects of dependence in high-dimensional multiple testing problems

Por Kim, Kyung In, van de Wiel, Mark A
Publicado em 2008

stepwiseCM: An R Package for Stepwise Classification of Cancer Samples Using Multiple Heterogeneous Data Sets

Por Obulkasim, Askar, van de Wiel, Mark A
Publicado em 2014

HCsnip: An R Package for Semi-supervised Snipping of the Hierarchical Clustering Tree

Por Obulkasim, Askar, van de Wiel, Mark A
Publicado no Cancer Inform (2015)

Microarray Data Analysis: From Hypotheses to Conclusions Using Gene Expression Data

Por Armstrong, Nicola J., van de Wiel, Mark A.
Publicado no Cell Oncol (2004)

CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss

Por van de Wiel, Mark A., van Wieringen, Wessel N.
Publicado em 2007

Stepwise classification of cancer samples using clinical and molecular data

Por Obulkasim, Askar, Meijer, Gerrit A, van de Wiel, Mark A
Publicado em 2011

Semi-supervised adaptive-height snipping of the hierarchical clustering tree

Por Obulkasim, Askar, Meijer, Gerrit A, van de Wiel, Mark A
Publicado no BMC Bioinformatics (2015)

Normalized, Segmented or Called aCGH Data?

Por van Wieringen, Wessel N., van de Wiel, Mark A., Ylstra, Bauke
Publicado em 2007

Testing for association between RNA-Seq and high-dimensional data

Por Rauschenberger, Armin, Jonker, Marianne A., van de Wiel, Mark A., Menezes, Renée X.
Publicado no BMC Bioinformatics (2016)

FocalCall: An R Package for the Annotation of Focal Copy Number Aberrations

Por Krijgsman, Oscar, Benner, Christian, Meijer, Gerrit A, van de Wiel, Mark A, Ylstra, Bauke
Publicado no Cancer Inform (2014)

Erratum to: Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation

Por Wahl, Simone, Boulesteix, Anne-Laure, Zierer, Astrid, Thorand, Barbara, van de Wiel, Mark A.
Publicado no BMC Med Res Methodol (2016)

ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs

Por van de Wiel, Mark A, Neerincx, Maarten, Buffart, Tineke E, Sie, Daoud, Verheul, Henk MW
Publicado em 2014

MLPAnalyzer: Data Analysis Tool for Reliable Automated Normalization of MLPA Fragment Data

Por Coffa, Jordy, van de Wiel, Mark A., Diosdado, Begoña, Carvalho, Beatriz, Schouten, Jan, Meijer, Gerrit A.
Publicado no Cell Oncol (2008)

Genome-wide estimation of transcript concentrations from spotted cDNA microarray data

Por Frigessi, Arnoldo, van de Wiel, Mark A., Holden, Marit, Svendsrud, Debbie H., Glad, Ingrid K., Lyng, Heidi
Publicado em 2005

Intensity-based analysis of dual-color gene expression data as an alternative to ratio-based analysis to enhance reproducibility

Por Bossers, Koen, Ylstra, Bauke, Brakenhoff, Ruud H, Smeets, Serge J, Verhaagen, Joost, van de Wiel, Mark A
Publicado em 2010

CGHpower: exploring sample size calculations for chromosomal copy number experiments

Por Scheinin, Ilari, Ferreira, José A, Knuutila, Sakari, Meijer, Gerrit A, van de Wiel, Mark A, Ylstra, Bauke
Publicado em 2010

Analysis of small-sample clinical genomics studies using multi-parameter shrinkage: application to high-throughput RNA interference screening

Por van de Wiel, Mark A, de Menezes, Renée X, Siebring-van Olst, Ellen, van Beusechem, Victor W
Publicado em 2013

Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses

Por van Wieringen, Wessel N, Unger, Kristian, Leday, Gwenaël GR, Krijgsman, Oscar, de Menezes, Renée X, Ylstra, Bauke, van de Wiel, Mark A
Publicado em 2012

Anti-proliferative action of vitamin D in MCF7 is still active after siRNA-VDR knock-down

Por Costa, José L, Eijk, Paul P, van de Wiel, Mark A, ten Berge, Derk, Schmitt, Fernando, Narvaez, Carmen J, Welsh, JoEllen, Ylstra, Bauke
Publicado em 2009

Genetic Classification of Oral and Oropharyngeal Carcinomas Identifies Subgroups with a Different Prognosis

Por Smeets, Serge J., Brakenhoff, Ruud H., Ylstrab, Bauke, van Wieringen, Wessel N., van de Wiel, Mark A., Leemans, C. René, Braakhuis, Boudewijn J. M.
Publicado no Cell Oncol (2009)