Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data

ανά Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G, Clarke, Robert, Ressom, Habtom W
Έκδοση 2008

Reverse engineering module networks by PSO-RNN hybrid modeling

ανά Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G, Clarke, Robert, Ressom, Habtom W
Έκδοση 2009

Reconstruction of Gene Regulatory Modules in Cancer Cell Cycle by Multi-Source Data Integration

ανά Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G., Clarke, Robert, Ressom, Habtom W.
Έκδοση 2010

Simultaneous Colorimetric Detection of a Variety of Salmonella spp. in Food and Environmental Samples by Optical Biosensing Using Oligonucleotide-Gold Nanoparticles

ανά Quintela, Irwin A., de los Reyes, Benildo G., Lin, Chih-Sheng, Wu, Vivian C. H.
Τόπος έκδοσης Front Microbiol (2019)

Novel allelic variation in the Phospholipase D alpha1 gene (OsPLDα1) of wild Oryza species implies to its low expression in rice bran

ανά Kaur, Amandeep, Neelam, Kumari, Kaur, Karminderbir, Kitazumi, Ai, de los Reyes, Benildo G., Singh, Kuldeep
Τόπος έκδοσης Sci Rep (2020)

Upstream regulatory architecture of rice genes: summarizing the baseline towards genus-wide comparative analysis of regulatory networks and allele mining

ανά de los Reyes, Benildo G, Mohanty, Bijayalaxmi, Yun, Song Joong, Park, Myoung-Ryoul, Lee, Dong-Yup
Τόπος έκδοσης Rice (N Y) (2015)

Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for cell survival under complete submergence

ανά Mohanty, Bijayalaxmi, Takahashi, Hirokazu, de los Reyes, Benildo G., Wijaya, Edward, Nakazono, Mikio, Lee, Dong-Yup
Τόπος έκδοσης Rice (N Y) (2016)

Contributions of Adaptive Plant Architecture to Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice: Molecular Mechanisms Based on Transcriptional Networks

ανά Pabuayon, Isaiah Catalino M., Kitazumi, Ai, Gregorio, Glenn B., Singh, Rakesh Kumar, de los Reyes, Benildo G.
Τόπος έκδοσης Front Genet (2020)

Networks of Physiological Adjustments and Defenses, and Their Synergy With Sodium (Na(+)) Homeostasis Explain the Hidden Variation for Salinity Tolerance Across the Cultivated Goss...

ανά Cushman, Kevin R., Pabuayon, Isaiah C. M., Hinze, Lori L., Sweeney, Megan E., de los Reyes, Benildo G.
Τόπος έκδοσης Front Plant Sci (2020)

Cis-regulatory signatures of orthologous stress-associated bZIP transcription factors from rice, sorghum and Arabidopsis based on phylogenetic footprints

ανά Xu, Fuyu, Park, Myoung-Ryoul, Kitazumi, Ai, Herath, Venura, Mohanty, Bijayalaxmi, Yun, Song Joong, de los Reyes, Benildo G
Έκδοση 2012

Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on Non-host Tomato Environment Revealed by Transcriptional Network Modeling: Implications to Adaptation and Selec...

ανά Shu, Xiaomei, Singh, Manavi, Karampudi, Naga Bhushana Rao, Bridges, David F., Kitazumi, Ai, Wu, Vivian C. H., De los Reyes, Benildo G.
Τόπος έκδοσης Front Microbiol (2020)

An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice

ανά Cheng, Chen, Yun, Kil-Young, Ressom, Habtom W, Mohanty, Bijayalaxmi, Bajic, Vladimir B, Jia, Yulin, Yun, Song Joong, de los Reyes, Benildo G
Έκδοση 2007

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

ανά Wijaya Edward, Mauleon Ramil, Xu Fuyu, Herath Venura, Mohanty Bijayalaxmi, Park Myoung, Yun Kil-Young, Bajic Vladimir B, Bruskiewich Richard, de los Reyes Benildo G
Έκδοση 2010-01-01

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

ανά Yun, Kil-Young, Park, Myoung Ryoul, Mohanty, Bijayalaxmi, Herath, Venura, Xu, Fuyu, Mauleon, Ramil, Wijaya, Edward, Bajic, Vladimir B, Bruskiewich, Richard, de los Reyes, Benildo G
Έκδοση 2010

Novel and Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice Created by Physiological Coupling-Uncoupling and Network Rewiring Effects

ανά Pabuayon, Isaiah C. M., Kitazumi, Ai, Cushman, Kevin R., Singh, Rakesh Kumar, Gregorio, Glenn B., Dhatt, Balpreet, Zabet-Moghaddam, Masoud, Walia, Harkamal, de los Reyes, Benildo G.
Τόπος έκδοσης Front Plant Sci (2021)

Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation

ανά Kitazumi, Ai, Pabuayon, Isaiah C. M., Ohyanagi, Hajime, Fujita, Masahiro, Osti, Bipush, Shenton, Matthew R., Kakei, Yusuke, Nakamura, Yasukazu, Brar, Darshan S., Kurata, Nori, de los Reyes, Benildo G.
Τόπος έκδοσης Sci Rep (2018)