Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data

Autor Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G, Clarke, Robert, Ressom, Habtom W
Vydáno 2008

Reverse engineering module networks by PSO-RNN hybrid modeling

Autor Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G, Clarke, Robert, Ressom, Habtom W
Vydáno 2009

Reconstruction of Gene Regulatory Modules in Cancer Cell Cycle by Multi-Source Data Integration

Autor Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G., Clarke, Robert, Ressom, Habtom W.
Vydáno 2010

Simultaneous Colorimetric Detection of a Variety of Salmonella spp. in Food and Environmental Samples by Optical Biosensing Using Oligonucleotide-Gold Nanoparticles

Autor Quintela, Irwin A., de los Reyes, Benildo G., Lin, Chih-Sheng, Wu, Vivian C. H.
Vydáno v Front Microbiol (2019)

Novel allelic variation in the Phospholipase D alpha1 gene (OsPLDα1) of wild Oryza species implies to its low expression in rice bran

Autor Kaur, Amandeep, Neelam, Kumari, Kaur, Karminderbir, Kitazumi, Ai, de los Reyes, Benildo G., Singh, Kuldeep
Vydáno v Sci Rep (2020)

Upstream regulatory architecture of rice genes: summarizing the baseline towards genus-wide comparative analysis of regulatory networks and allele mining

Autor de los Reyes, Benildo G, Mohanty, Bijayalaxmi, Yun, Song Joong, Park, Myoung-Ryoul, Lee, Dong-Yup
Vydáno v Rice (N Y) (2015)

Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for cell survival under complete submergence

Autor Mohanty, Bijayalaxmi, Takahashi, Hirokazu, de los Reyes, Benildo G., Wijaya, Edward, Nakazono, Mikio, Lee, Dong-Yup
Vydáno v Rice (N Y) (2016)

Contributions of Adaptive Plant Architecture to Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice: Molecular Mechanisms Based on Transcriptional Networks

Autor Pabuayon, Isaiah Catalino M., Kitazumi, Ai, Gregorio, Glenn B., Singh, Rakesh Kumar, de los Reyes, Benildo G.
Vydáno v Front Genet (2020)

Networks of Physiological Adjustments and Defenses, and Their Synergy With Sodium (Na(+)) Homeostasis Explain the Hidden Variation for Salinity Tolerance Across the Cultivated Goss...

Autor Cushman, Kevin R., Pabuayon, Isaiah C. M., Hinze, Lori L., Sweeney, Megan E., de los Reyes, Benildo G.
Vydáno v Front Plant Sci (2020)

Cis-regulatory signatures of orthologous stress-associated bZIP transcription factors from rice, sorghum and Arabidopsis based on phylogenetic footprints

Autor Xu, Fuyu, Park, Myoung-Ryoul, Kitazumi, Ai, Herath, Venura, Mohanty, Bijayalaxmi, Yun, Song Joong, de los Reyes, Benildo G
Vydáno 2012

Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on Non-host Tomato Environment Revealed by Transcriptional Network Modeling: Implications to Adaptation and Selec...

Autor Shu, Xiaomei, Singh, Manavi, Karampudi, Naga Bhushana Rao, Bridges, David F., Kitazumi, Ai, Wu, Vivian C. H., De los Reyes, Benildo G.
Vydáno v Front Microbiol (2020)

An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice

Autor Cheng, Chen, Yun, Kil-Young, Ressom, Habtom W, Mohanty, Bijayalaxmi, Bajic, Vladimir B, Jia, Yulin, Yun, Song Joong, de los Reyes, Benildo G
Vydáno 2007

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

Autor Wijaya Edward, Mauleon Ramil, Xu Fuyu, Herath Venura, Mohanty Bijayalaxmi, Park Myoung, Yun Kil-Young, Bajic Vladimir B, Bruskiewich Richard, de los Reyes Benildo G
Vydáno 2010-01-01

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

Autor Yun, Kil-Young, Park, Myoung Ryoul, Mohanty, Bijayalaxmi, Herath, Venura, Xu, Fuyu, Mauleon, Ramil, Wijaya, Edward, Bajic, Vladimir B, Bruskiewich, Richard, de los Reyes, Benildo G
Vydáno 2010

Novel and Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice Created by Physiological Coupling-Uncoupling and Network Rewiring Effects

Autor Pabuayon, Isaiah C. M., Kitazumi, Ai, Cushman, Kevin R., Singh, Rakesh Kumar, Gregorio, Glenn B., Dhatt, Balpreet, Zabet-Moghaddam, Masoud, Walia, Harkamal, de los Reyes, Benildo G.
Vydáno v Front Plant Sci (2021)

Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation

Autor Kitazumi, Ai, Pabuayon, Isaiah C. M., Ohyanagi, Hajime, Fujita, Masahiro, Osti, Bipush, Shenton, Matthew R., Kakei, Yusuke, Nakamura, Yasukazu, Brar, Darshan S., Kurata, Nori, de los Reyes, Benildo G.
Vydáno v Sci Rep (2018)