NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism in vitro

по Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2002

Mechanism of NusG-stimulated pausing, hairpin-dependent pause site selection and intrinsic termination at overlapping pause and termination sites in the Bacillus subtilis trp leade...

по Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2010

NusG/Spt5: Are there Common Functions of this Ubiquitous Transcription Elongation Factor?

по Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2014

Translation Control of trpG from Transcripts Originating from the Folate Operon Promoter of Bacillus subtilis Is Influenced by Translation-Mediated Displacement of Bound TRAP, Whil...

по Yakhnin, Helen, Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2007

Function of the Bacillus subtilis transcription elongation factor NusG in hairpin-dependent RNA polymerase pausing in the trp leader

по Yakhnin, Alexander V., Yakhnin, Helen, Babitzke, Paul
Опубликовано 2008

Ribosomal protein L10(L12)(4) autoregulates expression of the Bacillus subtilis rplJL operon by a transcription attenuation mechanism

по Yakhnin, Helen, Yakhnin, Alexander V., Babitzke, Paul
Опубликовано в: Nucleic Acids Res (2015)

Gel Mobility Shift Assays to Detect Protein–RNA Interactions

по Yakhnin, Alexander V., Yakhnin, Helen, Babitzke, Paul
Опубликовано в: Methods Mol Biol (2012)

NusG Is a Sequence-specific RNA Polymerase Pause Factor That Binds to the Non-template DNA within the Paused Transcription Bubble

по Yakhnin, Alexander V., Murakami, Katsuhiko S., Babitzke, Paul
Опубликовано в: J Biol Chem (2016)

Modular Organization of the NusA- and NusG-Stimulated RNA Polymerase Pause Signal That Participates in the Bacillus subtilis trp Operon Attenuation Mechanism

по Mondal, Smarajit, Yakhnin, Alexander V., Babitzke, Paul
Опубликовано в: J Bacteriol (2017)

trp RNA-Binding Attenuation Protein-5′ Stem-Loop RNA Interaction Is Required for Proper Transcription Attenuation Control of the Bacillus subtilis trpEDCFBA Operon

по Du, Hansen, Yakhnin, Alexander V., Dharmaraj, Subramanian, Babitzke, Paul
Опубликовано 2000

The trp RNA-Binding Attenuation Protein of Bacillus subtilis Regulates Translation of the Tryptophan Transport Gene trpP (yhaG) by Blocking Ribosome Binding

по Yakhnin, Helen, Zhang, Hong, Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2004

Expression of the Bacillus subtilis trpEDCFBA Operon Is Influenced by Translational Coupling and Rho Termination Factor

по Yakhnin, Helen, Babiarz, Joshua E., Yakhnin, Alexander V., Babitzke, Paul
Опубликовано 2001

NusA-dependent transcription termination prevents misregulation of global gene expression

по Mondal, Smarajit, Yakhnin, Alexander V., Sebastian, Aswathy, Albert, Istvan, Babitzke, Paul
Опубликовано в: Nat Microbiol (2016)

Nascent RNA sequencing identifies a widespread sigma70-dependent pausing regulated by Gre factors in bacteria

по Sun, Zhe, Yakhnin, Alexander V., FitzGerald, Peter C., Mclntosh, Carl E., Kashlev, Mikhail
Опубликовано в: Nat Commun (2021)

Complex regulation of the global regulatory gene csrA: CsrA-mediated translational repression, transcription from five promoters by Eσ(70) and Eσ(S), and indirect transcriptional a...

по Yakhnin, Helen, Yakhnin, Alexander V., Baker, Carol S., Sineva, Elena, Berezin, Igor, Romeo, Tony, Babitzke, Paul
Опубликовано 2011

CsrA activates flhDC expression by protecting flhDC mRNA from RNase E-mediated cleavage

по Yakhnin, Alexander V., Baker, Carol S., Vakulskas, Christopher A., Yakhnin, Helen, Berezin, Igor, Romeo, Tony, Babitzke, Paul
Опубликовано 2013

NusG-Dependent RNA Polymerase Pausing and Tylosin-Dependent Ribosome Stalling Are Required for Tylosin Resistance by Inducing 23S rRNA Methylation in Bacillus subtilis

по Yakhnin, Helen, Yakhnin, Alexander V., Mouery, Brandon L., Mandell, Zachary F., Karbasiafshar, Catherine, Kashlev, Mikhail, Babitzke, Paul
Опубликовано в: mBio (2019)

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA

по Mandell, Zachary F, Oshiro, Reid T, Yakhnin, Alexander V, Vishwakarma, Rishi, Kashlev, Mikhail, Kearns, Daniel B, Babitzke, Paul
Опубликовано в: eLife (2021)

NusG controls transcription pausing and RNA polymerase translocation throughout the Bacillus subtilis genome

по Yakhnin, Alexander V., FitzGerald, Peter C., McIntosh, Carl, Yakhnin, Helen, Kireeva, Maria, Turek-Herman, Joshua, Mandell, Zachary F., Kashlev, Mikhail, Babitzke, Paul
Опубликовано в: Proc Natl Acad Sci U S A (2020)