Microsatellites Are Molecular Clocks That Support Accurate Inferences about History

by Sun, James X., Mullikin, James C., Patterson, Nick, Reich, David E.
Published 2009

The cardiac output from blood pressure algorithms trial*

by Sun, James X., Reisner, Andrew T., Saeed, Mohammed, Heldt, Thomas, Mark, Roger G.
Published 2009

A direct characterization of human mutation based on microsatellites

by Sun, James X., Helgason, Agnar, Masson, Gisli, Ebenesersdóttir, Sigríđur Sunna, Li, Heng, Mallick, Swapan, Gnerre, Sante, Patterson, Nick, Kong, Augustine, Reich, David, Stefansson, Kari
Published 2012

A computational approach to distinguish somatic vs. germline origin of genomic alterations from deep sequencing of cancer specimens without a matched normal

by Sun, James X., He, Yuting, Sanford, Eric, Montesion, Meagan, Frampton, Garrett M., Vignot, Stéphane, Soria, Jean-Charles, Ross, Jeffrey S., Miller, Vincent A., Stephens, Phil J., Lipson, Doron, Yelensky, Roman
Published in PLoS Comput Biol (2018)

Broad Detection of Alterations Predicted to Confer Lack of Benefit From EGFR Antibodies or Sensitivity to Targeted Therapy in Advanced Colorectal Cancer

by Rankin, Andrew, Klempner, Samuel J., Erlich, Rachel, Sun, James X., Grothey, Axel, Fakih, Marwan, George, Thomas J., Lee, Jeeyun, Ross, Jeffrey S., Stephens, Philip J., Miller, Vincent A., Ali, Siraj M., Schrock, Alexa B.
Published in Oncologist (2016)

A Novel Next-Generation Sequencing Approach to Detecting Microsatellite Instability and Pan-Tumor Characterization of 1000 Microsatellite Instability–High Cases in 67,000 Patient S...

by Trabucco, Sally E., Gowen, Kyle, Maund, Sophia L., Sanford, Eric, Fabrizio, David A., Hall, Michael J., Yakirevich, Evgeny, Gregg, Jeffrey P., Stephens, Phil J., Frampton, Garrett M., Hegde, Priti S., Miller, Vincent A., Ross, Jeffrey S., Hartmaier, Ryan J., Huang, Shih-Min A., Sun, James X.
Published in J Mol Diagn (2019)

Comprehensive genomic profiling of clinically advanced medullary thyroid carcinoma

by Heilmann, Andreas M., Subbiah, Vivek, Wang, Kai, Sun, James X., Elvin, Julia A., Chmielecki, Juliann, Sherman, Steven I., Murthy, Ravi, Busaidy, Naifa L., Subbiah, Ishwaria, Yelensky, Roman, Nangia, Chaitali, Vergilio, Jo-Anne, Khan, Saad A., Erlich, Rachel L., Lipson, Doron, Ross, Jeffrey S., Miller, Vincent A., Shah, Manisha, Ali, Siraj M., Stephens, Philip J.
Published in Oncology (2016)

First-in-human trial of multikinase VEGF inhibitor regorafenib and anti-EGFR antibody cetuximab in advanced cancer patients

by Subbiah, Vivek, Khawaja, Muhammad Rizwan, Hong, David S., Amini, Behrang, Yungfang, Jiang, Liu, Hui, Johnson, Adrienne, Schrock, Alexa B., Ali, Siraj M., Sun, James X., Fabrizio, David, Piha-Paul, Sarina, Fu, Siqing, Tsimberidou, Apostolia M., Naing, Aung, Janku, Filip, Karp, Daniel D., Overman, Michael, Eng, Cathy, Kopetz, Scott, Meric-Bernstam, Funda, Falchook, Gerald S.
Published in JCI Insight (2017)

Loss of Heterozygosity at the CYP2D6 Locus in Breast Cancer: Implications for Germline Pharmacogenetic Studies

by Goetz, Matthew P., Sun, James X., Suman, Vera J., Silva, Grace O., Perou, Charles M., Nakamura, Yusuke, Cox, Nancy J., Stephens, Philip J., Miller, Vincent A., Ross, Jeffrey S., Chen, David, Safgren, Stephanie L., Kuffel, Mary J., Ames, Matthew M., Kalari, Krishna R., Gomez, Henry L., Gonzalez-Angulo, Ana M., Burgues, Octavio, Brauch, Hiltrud B., Ingle, James N., Ratain, Mark J., Yelensky, Roman
Published in J Natl Cancer Inst (2014)

Genomic Profiling of a Large Set of Diverse Pediatric Cancers Identifies Known and Novel Mutations across Tumor Spectra

by Chmielecki, Juliann, Bailey, Mark, He, Jie, Elvin, Julia, Vergilio, Jo-Anne, Ramkissoon, Shakti, Suh, James, Frampton, Garrett M., Sun, James X., Morley, Samantha, Spritz, Daniel, Ali, Siraj, Gay, Laurie, Erlich, Rachel L., Ross, Jeffrey S., Buxhaku, Joana, Davies, Hilary, Faso, Vinny, Germain, Alexis, Glanville, Blair, Miller, Vincent A., Stephens, Philip J., Janeway, Katherine A., Maris, John M., Meshinchi, Soheil, Pugh, Trevor J., Shern, Jack F., Lipson, Doron
Published in Cancer Res (2017)

Targeted next generation sequencing identifies markers of response to PD-1 blockade

by Johnson, Douglas B., Frampton, Garrett M., Rioth, Matthew J., Yusko, Erik, Xu, Yaomin, Guo, Xingyi, Ennis, Riley C., Fabrizio, David, Chalmers, Zachary R., Greenbowe, Joel, Ali, Siraj M., Balasubramanian, Sohail, Sun, James X., He, Yuting, Frederick, Dennie T., Puzanov, Igor, Balko, Justin M., Cates, Justin M., Ross, Jeffrey S., Sanders, Catherine, Robins, Harlan, Shyr, Yu, Miller, Vincent A., Stephens, Philip J., Sullivan, Ryan J., Sosman, Jeffrey A., Lovly, Christine M.
Published in Cancer Immunol Res (2016)

Clinical Actionability of Comprehensive Genomic Profiling for Management of Rare or Refractory Cancers

by Hirshfield, Kim M., Tolkunov, Denis, Zhong, Hua, Ali, Siraj M., Stein, Mark N., Murphy, Susan, Vig, Hetal, Vazquez, Alexei, Glod, John, Moss, Rebecca A., Belyi, Vladimir, Chan, Chang S., Chen, Suzie, Goodell, Lauri, Foran, David, Yelensky, Roman, Palma, Norma A., Sun, James X., Miller, Vincent A., Stephens, Philip J., Ross, Jeffrey S., Kaufman, Howard, Poplin, Elizabeth, Mehnert, Janice, Tan, Antoinette R., Bertino, Joseph R., Aisner, Joseph, DiPaola, Robert S., Rodriguez-Rodriguez, Lorna, Ganesan, Shridar
Published in Oncologist (2016)