Benchmarking natural-language parsers for biological applications using dependency graphs

Por Clegg, Andrew B, Shepherd, Adrian J
Publicado em 2007

An analysis of B-cell epitope discontinuity

Por Sivalingam, Ganesh N., Shepherd, Adrian J.
Publicado em 2012

Utilities for High-Throughput Analysis of B-Cell Clonal Lineages

Por Lees, William D., Shepherd, Adrian J.
Publicado no J Immunol Res (2015)

A realistic assessment of methods for extracting gene/protein interactions from free text

Por Kabiljo, Renata, Clegg, Andrew B, Shepherd, Adrian J
Publicado em 2009

A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2

Por Lees, William D., Moss, David S., Shepherd, Adrian J.
Publicado em 2010

An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs

Por Garcia-Alcalde, Fernando, Blanco, Armando, Shepherd, Adrian J
Publicado em 2010

Analysis of Antigenically Important Residues in Human Influenza A Virus in Terms of B-Cell Epitopes

Por Lees, William D., Moss, David S., Shepherd, Adrian J.
Publicado em 2011

Towards a lightweight generic computational grid framework for biological research

Por Halling-Brown, Mark D, Moss, David S, Shepherd, Adrian J
Publicado em 2008

A text-mining system for extracting metabolic reactions from full-text articles

Por Czarnecki, Jan, Nobeli, Irene, Smith, Adrian M, Shepherd, Adrian J
Publicado em 2012

Investigating Substitutions in Antibody–Antigen Complexes Using Molecular Dynamics: A Case Study with Broad-spectrum, Influenza A Antibodies

Por Lees, William D., Stejskal, Lenka, Moss, David S., Shepherd, Adrian J.
Publicado no Front Immunol (2017)

Toward predicting protein topology: An approach to identifying β hairpins

Por de la Cruz, Xavier, Hutchinson, E. Gail, Shepherd, Adrian, Thornton, Janet M.
Publicado em 2002

Missed, Not Missing: Phylogenomic Evidence for the Existence of Avian FoxP3

Por Denyer, Michael P., Pinheiro, Dammy Y., Garden, Oliver A., Shepherd, Adrian J.
Publicado no PLoS One (2016)

Characterization of the UK anthrax vaccine and human immunogenicity

Por Modi, Tapasvi, Gervais, David, Smith, Stuart, Miller, Julie, Subramaniam, Shaan, Thalassinos, Konstantinos, Shepherd, Adrian
Publicado no Hum Vaccin Immunother (2020)

Factor VIII cross-matches to the human proteome reduce the predicted inhibitor risk in missense mutation hemophilia A

Por Hart, Daniel P., Uzun, Nazmiye, Skelton, Stuart, Kakoschke, Alison, Househam, Jacob, Moss, David S., Shepherd, Adrian J.
Publicado no Haematologica (2019)

Increased Epitope Complexity Correlated with Antibody Affinity Maturation and a Novel Binding Mode Revealed by Structures of Rabbit Antibodies against the Third Variable Loop (V3)...

Por Pan, Ruimin, Qin, Yali, Banasik, Marisa, Lees, William, Shepherd, Adrian J., Cho, Michael W., Kong, Xiang-Peng
Publicado no J Virol (2018)

Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein

Por Stejskal, Lenka, Lees, William D., Moss, David S., Palor, Machaela, Bingham, Richard J., Shepherd, Adrian J., Grove, Joe
Publicado no PLoS Comput Biol (2020)

VIDA: a virus database system for the organization of animal virus genome open reading frames

Por Albà, M. Mar, Lee, David, Pearl, Frances M. G., Shepherd, Adrian J., Martin, Nigel, Orengo, Christine A., Kellam, Paul
Publicado em 2001

The CATH extended protein-family database: Providing structural annotations for genome sequences

Por Pearl, Frances M.G., Lee, David, Bray, James E., Buchan, Daniel W.A., Shepherd, Adrian J., Orengo, Christine A.
Publicado em 2002

Evaluation of a novel multi-immunogen vaccine strategy for targeting 4E10/10E8 neutralizing epitopes on HIV-1 gp41 membrane proximal external region

Por Banerjee, Saikat, Shi, Heliang, Banasik, Marisa, Moon, Hojin, Lees, William, Qin, Yali, Harley, Andrew, Shepherd, Adrian, Cho, Michael W.
Publicado no Virology (2017)

HVint: A Strategy for Identifying Novel Protein-Protein Interactions in Herpes Simplex Virus Type 1

Por Ashford, Paul, Hernandez, Anna, Greco, Todd Michael, Buch, Anna, Sodeik, Beate, Cristea, Ileana Mihaela, Grünewald, Kay, Shepherd, Adrian, Topf, Maya
Publicado no Mol Cell Proteomics (2016)