Benchmarking natural-language parsers for biological applications using dependency graphs

Yazar: Clegg, Andrew B, Shepherd, Adrian J
Baskı/Yayın Bilgisi 2007

An analysis of B-cell epitope discontinuity

Yazar: Sivalingam, Ganesh N., Shepherd, Adrian J.
Baskı/Yayın Bilgisi 2012

Utilities for High-Throughput Analysis of B-Cell Clonal Lineages

Yazar: Lees, William D., Shepherd, Adrian J.
Yayımlandı J Immunol Res (2015)

A realistic assessment of methods for extracting gene/protein interactions from free text

Yazar: Kabiljo, Renata, Clegg, Andrew B, Shepherd, Adrian J
Baskı/Yayın Bilgisi 2009

A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2

Yazar: Lees, William D., Moss, David S., Shepherd, Adrian J.
Baskı/Yayın Bilgisi 2010

An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs

Yazar: Garcia-Alcalde, Fernando, Blanco, Armando, Shepherd, Adrian J
Baskı/Yayın Bilgisi 2010

Analysis of Antigenically Important Residues in Human Influenza A Virus in Terms of B-Cell Epitopes

Yazar: Lees, William D., Moss, David S., Shepherd, Adrian J.
Baskı/Yayın Bilgisi 2011

Towards a lightweight generic computational grid framework for biological research

Yazar: Halling-Brown, Mark D, Moss, David S, Shepherd, Adrian J
Baskı/Yayın Bilgisi 2008

A text-mining system for extracting metabolic reactions from full-text articles

Yazar: Czarnecki, Jan, Nobeli, Irene, Smith, Adrian M, Shepherd, Adrian J
Baskı/Yayın Bilgisi 2012

Investigating Substitutions in Antibody–Antigen Complexes Using Molecular Dynamics: A Case Study with Broad-spectrum, Influenza A Antibodies

Yazar: Lees, William D., Stejskal, Lenka, Moss, David S., Shepherd, Adrian J.
Yayımlandı Front Immunol (2017)

Missed, Not Missing: Phylogenomic Evidence for the Existence of Avian FoxP3

Yazar: Denyer, Michael P., Pinheiro, Dammy Y., Garden, Oliver A., Shepherd, Adrian J.
Yayımlandı PLoS One (2016)

Factor VIII cross-matches to the human proteome reduce the predicted inhibitor risk in missense mutation hemophilia A

Yazar: Hart, Daniel P., Uzun, Nazmiye, Skelton, Stuart, Kakoschke, Alison, Househam, Jacob, Moss, David S., Shepherd, Adrian J.
Yayımlandı Haematologica (2019)

Increased Epitope Complexity Correlated with Antibody Affinity Maturation and a Novel Binding Mode Revealed by Structures of Rabbit Antibodies against the Third Variable Loop (V3)...

Yazar: Pan, Ruimin, Qin, Yali, Banasik, Marisa, Lees, William, Shepherd, Adrian J., Cho, Michael W., Kong, Xiang-Peng
Yayımlandı J Virol (2018)

Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein

Yazar: Stejskal, Lenka, Lees, William D., Moss, David S., Palor, Machaela, Bingham, Richard J., Shepherd, Adrian J., Grove, Joe
Yayımlandı PLoS Comput Biol (2020)

VIDA: a virus database system for the organization of animal virus genome open reading frames

Yazar: Albà, M. Mar, Lee, David, Pearl, Frances M. G., Shepherd, Adrian J., Martin, Nigel, Orengo, Christine A., Kellam, Paul
Baskı/Yayın Bilgisi 2001

The CATH extended protein-family database: Providing structural annotations for genome sequences

Yazar: Pearl, Frances M.G., Lee, David, Bray, James E., Buchan, Daniel W.A., Shepherd, Adrian J., Orengo, Christine A.
Baskı/Yayın Bilgisi 2002

VDJbase: an adaptive immune receptor genotype and haplotype database

Yazar: Omer, Aviv, Shemesh, Or, Peres, Ayelet, Polak, Pazit, Shepherd, Adrian J, Watson, Corey T, Boyd, Scott D, Collins, Andrew M, Lees, William, Yaari, Gur
Yayımlandı Nucleic Acids Res (2020)

Gene3D: Structural Assignment for Whole Genes and Genomes Using the CATH Domain Structure Database

Yazar: Buchan, Daniel W.A., Shepherd, Adrian J., Lee, David, Pearl, Frances M.G., Rison, Stuart C.G., Thornton, Janet M., Orengo, Christine A.
Baskı/Yayın Bilgisi 2002

OGRDB: a reference database of inferred immune receptor genes

Yazar: Lees, William, Busse, Christian E, Corcoran, Martin, Ohlin, Mats, Scheepers, Cathrine, Matsen, Frederick A, Yaari, Gur, Watson, Corey T, Collins, Andrew, Shepherd, Adrian J
Yayımlandı Nucleic Acids Res (2020)

sumrep: A Summary Statistic Framework for Immune Receptor Repertoire Comparison and Model Validation

Yazar: Olson, Branden J., Moghimi, Pejvak, Schramm, Chaim A., Obraztsova, Anna, Ralph, Duncan, Vander Heiden, Jason A., Shugay, Mikhail, Shepherd, Adrian J., Lees, William, Matsen, Frederick A.
Yayımlandı Front Immunol (2019)