The Archaeal Legacy of Eukaryotes: A Phylogenomic Perspective

por Guy, Lionel, Saw, Jimmy H., Ettema, Thijs J.G.
Publicado em 2014

‘Geoarchaeote NAG1' is a deeply rooting lineage of the archaeal order Thermoproteales rather than a new phylum

por Guy, Lionel, Spang, Anja, Saw, Jimmy H, Ettema, Thijs J G
Publicado em 2014

Close Encounters of the Third Domain: The Emerging Genomic View of Archaeal Diversity and Evolution

por Spang, Anja, Martijn, Joran, Saw, Jimmy H., Lind, Anders E., Guy, Lionel, Ettema, Thijs J. G.
Publicado em 2013

Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium

por Saw, Jimmy H. W., Yuryev, Anton, Kanbe, Masaomi, Hou, Shaobin, Young, Aaron G., Aizawa, Shin-Ichi, Alam, Maqsudul
Publicado em 2012

Asgard archaea are the closest prokaryotic relatives of eukaryotes

por Spang, Anja, Eme, Laura, Saw, Jimmy H., Caceres, Eva F., Zaremba-Niedzwiedzka, Katarzyna, Lombard, Jonathan, Guy, Lionel, Ettema, Thijs J. G.
Publicado no PLoS Genet (2018)

Cultivation and Complete Genome Sequencing of Gloeobacter kilaueensis sp. nov., from a Lava Cave in Kīlauea Caldera, Hawai'i

por Saw, Jimmy H. W., Schatz, Michael, Brown, Mark V., Kunkel, Dennis D., Foster, Jamie S., Shick, Harry, Christensen, Stephanie, Hou, Shaobin, Wan, Xuehua, Donachie, Stuart P.
Publicado em 2013

Draft Genome Sequence of Vibrio ostreicida Strain PP-203, the Type Strain of a Pathogen That Infects Bivalve Larvae

por Kumar, Ritikaa S., Galvis, Fabian, Wasson, Benjamin J., Saw, Jimmy H., Oline, David K., Barja, Juan L., Ushijima, Blake, Koyack, Marc J., Prado, Susana, Videau, Patrick
Publicado no Microbiol Resour Announc (2020)

Draft Genome Sequence of Vibrio sp. Strain OCN044, Isolated from Palmyra Atoll, Northern Line Islands

por Loughran, Rachel M., Esquivel, Abigail R., Deadmond, Monica C., Koyack, Marc J., Paddock, Brie E., O’Hanlon, Samantha M., Ushijima, Blake, Saw, Jimmy H., Videau, Patrick
Publicado no Microbiol Resour Announc (2020)

Complex archaea that bridge the gap between prokaryotes and eukaryotes

por Spang, Anja, Saw, Jimmy H., Jørgensen, Steffen L., Zaremba-Niedzwiedzka, Katarzyna, Martijn, Joran, Lind, Anders E., van Eijk, Roel, Schleper, Christa, Guy, Lionel, Ettema, Thijs J. G.
Publicado no Nature (2015)

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

por Saw, Jimmy H. W., Nunoura, Takuro, Hirai, Miho, Takaki, Yoshihiro, Parsons, Rachel, Michelsen, Michelle, Longnecker, Krista, Kujawinski, Elizabeth B., Stepanauskas, Ramunas, Landry, Zachary, Carlson, Craig A., Giovannoni, Stephen J.
Publicado no mBio (2020)

Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes

por Saw, Jimmy H., Spang, Anja, Zaremba-Niedzwiedzka, Katarzyna, Juzokaite, Lina, Dodsworth, Jeremy A., Murugapiran, Senthil K., Colman, Dan R., Takacs-Vesbach, Cristina, Hedlund, Brian P., Guy, Lionel, Ettema, Thijs J. G.
Publicado no Philos Trans R Soc Lond B Biol Sci (2015)

Assembling the Marine Metagenome, One Cell at a Time

por Woyke, Tanja, Xie, Gary, Copeland, Alex, González, José M., Han, Cliff, Kiss, Hajnalka, Saw, Jimmy H., Senin, Pavel, Yang, Chi, Chatterji, Sourav, Cheng, Jan-Fang, Eisen, Jonathan A., Sieracki, Michael E., Stepanauskas, Ramunas
Publicado em 2009

Draft Genome Sequence of Streptomyces sp. Strain ventii, Isolated from a Microbial Mat near Hydrothermal Vents within the Axial Seamount in the Pacific Ocean, and Resequencing of t...

por Loughran, Rachel M., Mitchell, Edward A., Vining, Oliver B., Gallegos, David A., Deadmond, Monica C., Wasson, Benjamin J., Pfannmuller, Kaysa M., Paddock, Brie E., Koyack, Marc J., Oline, David K., Ushijima, Blake, Saw, Jimmy H., McPhail, Kerry L., Videau, Patrick
Publicado no Microbiol Resour Announc (2020)

Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1

por Saw, Jimmy H, Mountain, Bruce W, Feng, Lu, Omelchenko, Marina V, Hou, Shaobin, Saito, Jennifer A, Stott, Matthew B, Li, Dan, Zhao, Guang, Wu, Junli, Galperin, Michael Y, Koonin, Eugene V, Makarova, Kira S, Wolf, Yuri I, Rigden, Daniel J, Dunfield, Peter F, Wang, Lei, Alam, Maqsudul
Publicado em 2008

Genome sequence of the deep-sea γ-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy

por Hou, Shaobin, Saw, Jimmy H., Lee, Kit Shan, Freitas, Tracey A., Belisle, Claude, Kawarabayasi, Yutaka, Donachie, Stuart P., Pikina, Alla, Galperin, Michael Y., Koonin, Eugene V., Makarova, Kira S., Omelchenko, Marina V., Sorokin, Alexander, Wolf, Yuri I., Li, Qing X., Keum, Young Soo, Campbell, Sonia, Denery, Judith, Aizawa, Shin-Ichi, Shibata, Satoshi, Malahoff, Alexander, Alam, Maqsudul
Publicado em 2004

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

por Ming, Ray, Hou, Shaobin, Feng, Yun, Yu, Qingyi, Dionne-Laporte, Alexandre, Saw, Jimmy H., Senin, Pavel, Wang, Wei, Ly, Benjamin V., Lewis, Kanako L. T., Salzberg, Steven L., Feng, Lu, Jones, Meghan R., Skelton, Rachel L., Murray, Jan E., Chen, Cuixia, Qian, Wubin, Shen, Junguo, Du, Peng, Eustice, Moriah, Tong, Eric, Tang, Haibao, Lyons, Eric, Paull, Robert E., Michael, Todd P., Wall, Kerr, Rice, Danny W., Albert, Henrik, Wang, Ming-Li, Zhu, Yun J., Schatz, Michael, Nagarajan, Niranjan, Acob, Ricelle A., Guan, Peizhu, Blas, Andrea, Wai, Ching Man, Ackerman, Christine M., Ren, Yan, Liu, Chao, Wang, Jianmei, Wang, Jianping, Na, Jong-Kuk, Shakirov, Eugene V., Haas, Brian, Thimmapuram, Jyothi, Nelson, David, Wang, Xiyin, Bowers, John E., Gschwend, Andrea R., Delcher, Arthur L., Singh, Ratnesh, Suzuki, Jon Y., Tripathi, Savarni, Neupane, Kabi, Wei, Hairong, Irikura, Beth, Paidi, Maya, Jiang, Ning, Zhang, Wenli, Presting, Gernot, Windsor, Aaron, Navajas-Pérez, Rafael, Torres, Manuel J., Feltus, F. Alex, Porter, Brad, Li, Yingjun, Burroughs, A. Max, Luo, Ming-Cheng, Liu, Lei, Christopher, David A., Mount, Stephen M., Moore, Paul H., Sugimura, Tak, Jiang, Jiming, Schuler, Mary A., Friedman, Vikki, Mitchell-Olds, Thomas, Shippen, Dorothy E., dePamphilis, Claude W., Palmer, Jeffrey D., Freeling, Michael, Paterson, Andrew H., Gonsalves, Dennis, Wang, Lei, Alam, Maqsudul
Publicado em 2008