Inclusion of neighboring base interdependencies substantially improves genome-wide prokaryotic transcription factor binding site prediction

Por Salama, Rafik A., Stekel, Dov J.
Publicado em 2010

Cellular senescence and its effector programs

Por Salama, Rafik, Sadaie, Mahito, Hoare, Matthew, Narita, Masashi
Publicado em 2014

Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data

Por Carroll, Thomas S., Liang, Ziwei, Salama, Rafik, Stark, Rory, de Santiago, Ines
Publicado em 2014

Heterogeneous Effects of Direct Hypoxia Pathway Activation in Kidney Cancer

Por Salama, Rafik, Masson, Norma, Simpson, Peter, Sciesielski, Lina Katrin, Sun, Min, Tian, Ya-Min, Ratcliffe, Peter John, Mole, David Robert
Publicado no PLoS One (2015)

Capture‐C reveals preformed chromatin interactions between HIF‐binding sites and distant promoters

Por Platt, James L, Salama, Rafik, Smythies, James, Choudhry, Hani, Davies, James OJ, Hughes, Jim R, Ratcliffe, Peter J, Mole, David R
Publicado no EMBO Rep (2016)

Redistribution of the Lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence

Por Sadaie, Mahito, Salama, Rafik, Carroll, Thomas, Tomimatsu, Kosuke, Chandra, Tamir, Young, Andrew R.J., Narita, Masako, Pérez-Mancera, Pedro A., Bennett, Dorothy C., Chong, Heung, Kimura, Hiroshi, Narita, Masashi
Publicado em 2013

Genetic variation at the 8q24.21 renal cancer susceptibility locus affects HIF binding to a MYC enhancer

Por Grampp, Steffen, Platt, James L., Lauer, Victoria, Salama, Rafik, Kranz, Franziska, Neumann, Viviana K., Wach, Sven, Stöhr, Christine, Hartmann, Arndt, Eckardt, Kai-Uwe, Ratcliffe, Peter J., Mole, David R., Schödel, Johannes
Publicado no Nat Commun (2016)

NOTCH1 mediates a switch between two distinct secretomes during senescence

Por Hoare, Matthew, Ito, Yoko, Kang, Tae-Won, Weekes, Michael P., Matheson, Nicholas J., Patten, Daniel A., Shetty, Shishir, Parry, Aled J., Menon, Suraj, Salama, Rafik, Antrobus, Robin, Tomimatsu, Kosuke, Howat, William, Lehner, Paul J., Zender, Lars, Narita, Masashi
Publicado no Nat Cell Biol (2016)

Independence of Repressive Histone Marks and Chromatin Compaction during Senescent Heterochromatic Layer Formation

Por Chandra, Tamir, Kirschner, Kristina, Thuret, Jean-Yves, Pope, Benjamin D., Ryba, Tyrone, Newman, Scott, Ahmed, Kashif, Samarajiwa, Shamith A., Salama, Rafik, Carroll, Thomas, Stark, Rory, Janky, Rekin’s, Narita, Masako, Xue, Lixiang, Chicas, Agustin, Nũnez, Sabrina, Janknecht, Ralf, Hayashi-Takanaka, Yoko, Wilson, Michael D., Marshall, Aileen, Odom, Duncan T., Babu, M. Madan, Bazett-Jones, David P., Tavaré, Simon, Edwards, Paul A.W., Lowe, Scott W., Kimura, Hiroshi, Gilbert, David M., Narita, Masashi
Publicado em 2012