Cavefish and the basis for eye loss

по Krishnan, Jaya, Rohner, Nicolas
Опубликовано в: Philos Trans R Soc Lond B Biol Sci (2017)

Parallelism and Epistasis in Skeletal Evolution Identified through Use of Phylogenomic Mapping Strategies

по Daane, Jacob M., Rohner, Nicolas, Konstantinidis, Peter, Djuranovic, Sergej, Harris, Matthew P.
Опубликовано в: Mol Biol Evol (2016)

Melanocortin 4 receptor mutations contribute to the adaptation of cavefish to nutrient-poor conditions

по Aspiras, Ariel C., Rohner, Nicolas, Martineau, Brian, Borowsky, Richard L., Tabin, Clifford J.
Опубликовано в: Proc Natl Acad Sci U S A (2015)

Zebrafish eda and edar Mutants Reveal Conserved and Ancestral Roles of Ectodysplasin Signaling in Vertebrates

по Harris, Matthew P., Rohner, Nicolas, Schwarz, Heinz, Perathoner, Simon, Konstantinidis, Peter, Nüsslein-Volhard, Christiane
Опубликовано 2008

Temperature preference of cave and surface populations of Astyanax mexicanus

по Tabin, Julius A., Aspiras, Ariel, Martineau, Brian, Riddle, Misty, Kowalko, Johanna, Borowsky, Richard, Rohner, Nicolas, Tabin, Clifford J.
Опубликовано в: Dev Biol (2018)

Cryptic Variation in Morphological Evolution: HSP90 as a Capacitor for Loss of Eyes in Cavefish

по Rohner, Nicolas, Jarosz, Dan F., Kowalko, Johanna E., Yoshizawa, Masato, Jeffery, William R., Borowsky, Richard L., Lindquist, Susan, Tabin, Clifford J.
Опубликовано 2013

Modulation of Fgfr1a Signaling in Zebrafish Reveals a Genetic Basis for the Aggression–Boldness Syndrome

по Norton, William H. J., Stumpenhorst, Katharina, Faus-Kessler, Theresa, Folchert, Anja, Rohner, Nicolas, Harris, Matthew P., Callebert, Jacques, Bally-Cuif, Laure
Опубликовано в: J Neurosci (2011)

Dark world rises: The emergence of cavefish as a model for the study of evolution, development, behavior, and disease

по McGaugh, Suzanne E., Kowalko, Johanna E., Duboue, Erik, Lewis, Peter, Franz-Odendaal, Tamara A., Rohner, Nicolas, Gross, Joshua B., Keene, Alex C.
Опубликовано в: J Exp Zool B Mol Dev Evol (2020)

Convergence in feeding posture occurs through different genetic loci in independently evolved cave populations of Astyanax mexicanus

по Kowalko, Johanna E., Rohner, Nicolas, Linden, Tess A., Rompani, Santiago B., Warren, Wesley C., Borowsky, Richard, Tabin, Clifford J., Jeffery, William R., Yoshizawa, Masato
Опубликовано 2013

Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system.

по Stahl, Bethany A., Peuß, Robert, McDole, Brittnee, Kenzior, Alexander, Jaggard, James B., Gaudenz, Karin, Krishnan, Jaya, McGaugh, Suzanne E., Duboue, Erik R., Keene, Alex C., Rohner, Nicolas
Опубликовано в: Dev Dyn (2019)

Genetic analysis of the loss of schooling behavior in cavefish reveals both sight-dependent and independent mechanisms

по Kowalko, Johanna E., Rohner, Nicolas, Rompani, Santiago B., Peterson, Brant K., Linden, Tess A., Yoshizawa, Masato, Kay, Emily H., Weber, Jesse, Hoekstra, Hopi E., Jeffery, William R., Borowsky, Richard, Tabin, Clifford J.
Опубликовано 2013

Insulin resistance in cavefish as an adaptation to a nutrient-limited environment

по Riddle, Misty R., Aspiras, Ariel C., Gaudenz, Karin, Peuß, Robert, Sung, Jenny Y., Martineau, Brian, Peavey, Megan, Box, Andrew C., Tabin, Julius A., McGaugh, Suzanne, Borowsky, Richard, Tabin, Clifford J., Rohner, Nicolas
Опубликовано в: Nature (2018)

An Adult Brain Atlas Reveals Broad Neuroanatomical Changes in Independently Evolved Populations of Mexican Cavefish

по Loomis, Cody, Peuß, Robert, Jaggard, James B., Wang, Yongfu, McKinney, Sean A., Raftopoulos, Stephan C., Raftopoulos, Austin, Whu, Daniel, Green, Matthew, McGaugh, Suzanne E., Rohner, Nicolas, Keene, Alex C., Duboue, Erik R.
Опубликовано в: Front Neuroanat (2019)

Repeated evolution of circadian clock dysregulation in cavefish populations

по Mack, Katya L., Jaggard, James B., Persons, Jenna L., Roback, Emma Y., Passow, Courtney N., Stanhope, Bethany A., Ferrufino, Estephany, Tsuchiya, Dai, Smith, Sarah E., Slaughter, Brian D., Kowalko, Johanna, Rohner, Nicolas, Keene, Alex C., McGaugh, Suzanne E.
Опубликовано в: PLoS Genet (2021)

The role of gene flow in rapid and repeated evolution of cave related traits in Mexican tetra, Astyanax mexicanus

по Herman, Adam, Brandvain, Yaniv, Weagley, James, Jeffery, William R., Keene, Alex C., Kono, Thomas J. Y., Bilandžija, Helena, Borowsky, Richard, Espinasa, Luis, O’Quin, Kelly, Ornelas-García, Claudia P., Yoshizawa, Masato, Carlson, Brian, Maldonado, Ernesto, Gross, Joshua B., Cartwright, Reed A., Rohner, Nicolas, Warren, Wesley C., McGaugh, Suzanne E.
Опубликовано в: Mol Ecol (2018)

The cavefish genome reveals candidate genes for eye loss

по McGaugh, Suzanne E., Gross, Joshua B., Aken, Bronwen, Blin, Maryline, Borowsky, Richard, Chalopin, Domitille, Hinaux, Hélène, Jeffery, William R., Keene, Alex, Ma, Li, Minx, Patrick, Murphy, Daniel, O’Quin, Kelly E., Rétaux, Sylvie, Rohner, Nicolas, Searle, Steve M. J., Stahl, Bethany A., Tabin, Cliff, Volff, Jean-Nicolas, Yoshizawa, Masato, Warren, Wesley C.
Опубликовано в: Nat Commun (2014)

A chromosome-level genome of Astyanax mexicanus surface fish for comparing population-specific genetic differences contributing to trait evolution

по Warren, Wesley C., Boggs, Tyler E., Borowsky, Richard, Carlson, Brian M., Ferrufino, Estephany, Gross, Joshua B., Hillier, LaDeana, Hu, Zhilian, Keene, Alex C., Kenzior, Alexander, Kowalko, Johanna E., Tomlinson, Chad, Kremitzki, Milinn, Lemieux, Madeleine E., Graves-Lindsay, Tina, McGaugh, Suzanne E., Miller, Jeffrey T., Mommersteeg, Mathilda T. M., Moran, Rachel L., Peuß, Robert, Rice, Edward S., Riddle, Misty R., Sifuentes-Romero, Itzel, Stanhope, Bethany A., Tabin, Clifford J., Thakur, Sunishka, Yamamoto, Yoshiyuki, Rohner, Nicolas
Опубликовано в: Nat Commun (2021)

Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution

по Smith, Jeramiah J, Kuraku, Shigehiro, Holt, Carson, Sauka-Spengler, Tatjana, Jiang, Ning, Campbell, Michael S, Yandell, Mark D, Manousaki, Tereza, Meyer, Axel, Bloom, Ona E, Morgan, Jennifer R, Buxbaum, Joseph D, Sachidanandam, Ravi, Sims, Carrie, Garruss, Alexander S, Cook, Malcolm, Krumlauf, Robb, Wiedemann, Leanne M, Sower, Stacia A, Decatur, Wayne A, Hall, Jeffrey A, Amemiya, Chris T, Saha, Nil R, Buckley, Katherine M, Rast, Jonathan P, Das, Sabyasachi, Hirano, Masayuki, McCurley, Nathanael, Guo, Peng, Rohner, Nicolas, Tabin, Clifford J, Piccinelli, Paul, Elgar, Greg, Ruffier, Magali, Aken, Bronwen L, Searle, Stephen MJ, Muffato, Matthieu, Pignatelli, Miguel, Herrero, Javier, Jones, Matthew, Brown, C Titus, Chung-Davidson, Yu-Wen, Nanlohy, Kaben G, Libants, Scot V, Yeh, Chu-Yin, McCauley, David W, Langeland, James A, Pancer, Zeev, Fritzsch, Bernd, de Jong, Pieter J, Zhu, Baoli, Fulton, Lucinda L, Theising, Brenda, Flicek, Paul, Bronner, Marianne E, Warren, Wesley C, Clifton, Sandra W, Wilson, Richard K, Li, Weiming
Опубликовано 2013

Analysis of the African coelacanth genome sheds light on tetrapod evolution

по Amemiya, Chris T., Alföldi, Jessica, Lee, Alison P., Fan, Shaohua, Philippe, Hervé, MacCallum, Iain, Braasch, Ingo, Manousaki, Tereza, Schneider, Igor, Rohner, Nicolas, Organ, Chris, Chalopin, Domitille, Smith, Jeramiah J., Robinson, Mark, Dorrington, Rosemary A., Gerdol, Marco, Aken, Bronwen, Biscotti, Maria Assunta, Barucca, Marco, Baurain, Denis, Berlin, Aaron M., Blatch, Gregory L., Buonocore, Francesco, Burmester, Thorsten, Campbell, Michael S., Canapa, Adriana, Cannon, John P., Christoffels, Alan, De Moro, Gianluca, Edkins, Adrienne L., Fan, Lin, Fausto, Anna Maria, Feiner, Nathalie, Forconi, Mariko, Gamieldien, Junaid, Gnerre, Sante, Gnirke, Andreas, Goldstone, Jared V., Haerty, Wilfried, Hahn, Mark E., Hesse, Uljana, Hoffmann, Steve, Johnson, Jeremy, Karchner, Sibel I., Kuraku, Shigehiro, Lara, Marcia, Levin, Joshua Z., Litman, Gary W., Mauceli, Evan, Miyake, Tsutomu, Mueller, M. Gail, Nelson, David R., Nitsche, Anne, Olmo, Ettore, Ota, Tatsuya, Pallavicini, Alberto, Panji, Sumir, Picone, Barbara, Ponting, Chris P., Prohaska, Sonja J., Przybylski, Dariusz, Saha, Nil Ratan, Ravi, Vydianathan, Ribeiro, Filipe J., Sauka-Spengler, Tatjana, Scapigliati, Giuseppe, Searle, Stephen M. J., Sharpe, Ted, Simakov, Oleg, Stadler, Peter F., Stegeman, John J., Sumiyama, Kenta, Tabbaa, Diana, Tafer, Hakim, Turner-Maier, Jason, van Heusden, Peter, White, Simon, Williams, Louise, Yandell, Mark, Brinkmann, Henner, Volff, Jean-Nicolas, Tabin, Clifford J., Shubin, Neil, Schartl, Manfred, Jaffe, David, Postlethwait, John H., Venkatesh, Byrappa, Di Palma, Federica, Lander, Eric S., Meyer, Axel, Lindblad-Toh, Kerstin
Опубликовано 2013