Myb-induced Chromatin Remodeling at a Dual Enhancer/Promoter Element Involves Non-coding RNA Transcription and Is Disrupted by Oncogenic Mutations of v-myb

by Wilczek, Carola, Chayka, Olesya, Plachetka, Annette, Klempnauer, Karl-Heinz
Published 2009

C/EBPβ Induces Chromatin Opening at a Cell-Type-Specific Enhancer

by Plachetka, Annette, Chayka, Olesya, Wilczek, Carola, Melnik, Svitlana, Bonifer, Constanze, Klempnauer, Karl-Heinz
Published 2008

“Jumpstart and gain” model for dosage compensation in Drosophila based on direct sequencing of nascent transcripts

by Ferrari, Francesco, Plachetka, Annette, Alekseyenko, Artyom A., Jung, Youngsook L., Ozsolak, Fatih, Kharchenko, Peter V., Park, Peter J., Kuroda, Mitzi I.
Published 2013

Enrichment of HP1a on Drosophila Chromosome 4 Genes Creates an Alternate Chromatin Structure Critical for Regulation in this Heterochromatic Domain

by Riddle, Nicole C., Jung, Youngsook L., Gu, Tingting, Alekseyenko, Artyom A., Asker, Dalal, Gui, Hongxing, Kharchenko, Peter V., Minoda, Aki, Plachetka, Annette, Schwartz, Yuri B., Tolstorukov, Michael Y., Kuroda, Mitzi I., Pirrotta, Vincenzo, Karpen, Gary H., Park, Peter J., Elgin, Sarah C. R.
Published 2012

Sequence-Specific Targeting of Dosage Compensation in Drosophila Favors an Active Chromatin Context

by Alekseyenko, Artyom A., Ho, Joshua W. K., Peng, Shouyong, Gelbart, Marnie, Tolstorukov, Michael Y., Plachetka, Annette, Kharchenko, Peter V., Jung, Youngsook L., Gorchakov, Andrey A., Larschan, Erica, Gu, Tingting, Minoda, Aki, Riddle, Nicole C., Schwartz, Yuri B., Elgin, Sarah C. R., Karpen, Gary H., Pirrotta, Vincenzo, Kuroda, Mitzi I., Park, Peter J.
Published 2012

Correction: Sequence-Specific Targeting of Dosage Compensation in Drosophila Favors an Active Chromatin Context

by Alekseyenko, Artyom A., Ho, Joshua W. K., Peng, Shouyong, Gelbart, Marnie, Tolstorukov, Michael Y., Plachetka, Annette, Kharchenko, Peter V., Jung, Youngsook L., Gorchakov, Andrey A., Larschan, Erica, Gu, Tingting, Minoda, Aki, Riddle, Nicole C., Schwartz, Yuri B., Elgin, Sarah C. R., Karpen, Gary H., Pirrotta, Vincenzo, Kuroda, Mitzi I., Park, Peter J.
Published 2014

Nature and function of insulator protein binding sites in the Drosophila genome

by Schwartz, Yuri B., Linder-Basso, Daniela, Kharchenko, Peter V., Tolstorukov, Michael Y., Kim, Maria, Li, Hua-Bing, Gorchakov, Andrey A., Minoda, Aki, Shanower, Gregory, Alekseyenko, Artyom A., Riddle, Nicole C., Jung, Youngsook L., Gu, Tingting, Plachetka, Annette, Elgin, Sarah C.R., Kuroda, Mitzi I., Park, Peter J., Savitsky, Mikhail, Karpen, Gary H., Pirrotta, Vincenzo
Published 2012

Comprehensive analysis of the chromatin landscape in Drosophila

by Kharchenko, Peter V., Alekseyenko, Artyom A., Schwartz, Yuri B., Minoda, Aki, Riddle, Nicole C., Ernst, Jason, Sabo, Peter J., Larschan, Erica, Gorchakov, Andrey A., Gu, Tingting, Linder-Basso, Daniela, Plachetka, Annette, Shanower, Gregory, Tolstorukov, Michael Y., Luquette, Lovelace J., Xi, Ruibin, Jung, Youngsook L., Park, Richard W., Bishop, Eric P., Canfield, Theresa P., Sandstrom, Richard, Thurman, Robert E., MacAlpine, David M., Stamatoyannopoulos, John A., Kellis, Manolis, Elgin, Sarah C. R., Kuroda, Mitzi I., Pirrotta, Vincenzo, Karpen, Gary H., Park, Peter J.
Published 2010

Comparative analysis of metazoan chromatin organization

by Ho, Joshua W. K., Jung, Youngsook L., Liu, Tao, Alver, Burak H., Lee, Soohyun, Ikegami, Kohta, Sohn, Kyung-Ah, Minoda, Aki, Tolstorukov, Michael Y., Appert, Alex, Parker, Stephen C. J., Gu, Tingting, Kundaje, Anshul, Riddle, Nicole C., Bishop, Eric, Egelhofer, Thea A., Hu, Sheng’en Shawn, Alekseyenko, Artyom A., Rechtsteiner, Andreas, Asker, Dalal, Belsky, Jason A., Bowman, Sarah K., Chen, Q. Brent, Chen, Ron A-J, Day, Daniel S., Dong, Yan, Dose, Andrea C., Duan, Xikun, Epstein, Charles B., Ercan, Sevinc, Feingold, Elise A., Ferrari, Francesco, Garrigues, Jacob M., Gehlenborg, Nils, Good, Peter J., Haseley, Psalm, He, Daniel, Herrmann, Moritz, Hoffman, Michael M., Jeffers, Tess E., Kharchenko, Peter V., Kolasinska-Zwierz, Paulina, Kotwaliwale, Chitra V., Kumar, Nischay, Langley, Sasha A., Larschan, Erica N., Latorre, Isabel, Libbrecht, Maxwell W., Lin, Xueqiu, Park, Richard, Pazin, Michael J., Pham, Hoang N., Plachetka, Annette, Qin, Bo, Schwartz, Yuri B., Shoresh, Noam, Stempor, Przemyslaw, Vielle, Anne, Wang, Chengyang, Whittle, Christina M., Xue, Huiling, Kingston, Robert E., Kim, Ju Han, Bernstein, Bradley E., Dernburg, Abby F., Pirrotta, Vincenzo, Kuroda, Mitzi I., Noble, William S., Tullius, Thomas D., Kellis, Manolis, MacAlpine, David M., Strome, Susan, Elgin, Sarah C. R., Liu, Xiaole Shirley, Lieb, Jason D., Ahringer, Julie, Karpen, Gary H., Park, Peter J.
Published in Nature (2014)