In Silico Serotyping Based on Whole-Genome Sequencing Improves the Accuracy of Shigella Identification

Por Wu, Yun, Lau, Henry K., Lee, Teresa, Lau, David K., Payne, Justin
Publicado no Appl Environ Microbiol (2019)

Complete Genome and Methylome Sequences of Two Salmonella enterica spp.

Por Yao, Kuan, Muruvanda, Tim, Roberts, Richard J., Payne, Justin, Allard, Marc W., Hoffmann, Maria
Publicado no Genome Announc (2016)

Complete Genome and Methylome Sequences of Salmonella enterica subsp. enterica Serovar Panama (ATCC 7378) and Salmonella enterica subsp. enterica Serovar Sloterdijk (ATCC 15791)

Por Yao, Kuan, Muruvanda, Tim, Roberts, Richard J., Payne, Justin, Allard, Marc W., Hoffmann, Maria
Publicado no Genome Announc (2016)

Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United States

Por Hoffmann, Maria, Payne, Justin, Roberts, Richard J., Allard, Marc W., Brown, Eric W., Pettengill, James B.
Publicado no Genome Announc (2015)

Draft Genome Sequences of Clinical Vibrio parahaemolyticus Strains Isolated in Maryland (2010–2013)

Por Haendiges, Julie, Timme, Ruth, Allard, Marc, Myers, Robert A., Payne, Justin, Brown, Eric W., Evans, Peter, Gonzalez-Escalona, Narjol
Publicado em 2014

Complete Genome Sequence of Enteroinvasive Escherichia coli O96:H19 Associated with a Severe Foodborne Outbreak

Por Pettengill, Emily A., Hoffmann, Maria, Binet, Rachel, Roberts, Richard J., Payne, Justin, Allard, Marc, Michelacci, Valeria, Minelli, Fabio, Morabito, Stefano
Publicado no Genome Announc (2015)

Draft Genome Sequences of 40 Salmonella enterica Serovar Typhimurium Strains Isolated from Humans and Food in Brazil

Por Almeida, Fernanda, Medeiros, Marta Inês Cazentini, Rodrigues, Dália Prazeres, Payne, Justin, Timme, Ruth E., Allard, Marc W., Falcão, Juliana Pfrimer
Publicado no Genome Announc (2016)

Draft Genome Sequences of Two O104:H21 Escherichia coli Isolates Causing Hemorrhagic Colitis during a 1994 Montana Outbreak Provide Insight into Their Pathogenicity

Por Gonzalez-Escalona, Narjol, McFarland, Melinda A., Rump, Lydia V., Payne, Justin, Andrzejewski, Denis, Brown, Eric W., Evans, Peter S., Croley, Timothy R.
Publicado em 2013

First Fully Closed Genome Sequence of Salmonella enterica subsp. enterica Serovar Cubana Associated with a Food-Borne Outbreak

Por Hoffmann, Maria, Muruvanda, Tim, Pirone, Cary, Korlach, Jonas, Timme, Ruth, Payne, Justin, Evans, Peter, Meng, Jianghong, Brown, Eric W., Allard, Marc W.
Publicado em 2014

Draft Genome Sequences of Salmonella enterica subsp. enterica Serovars Typhimurium and Nottingham Isolated from Food Products

Por Wang, Hua, Zheng, Jie, Ayers, Sherry, Melka, David C., Curry, Phillip E., Payne, Justin S., Laasri, Anna, Wang, Charles, Hammack, Thomas S., Brown, Eric W.
Publicado no Genome Announc (2016)

Quantifying the Sensitivity of Soil Microbial Communities to Silver Sulfide Nanoparticles Using Metagenome Sequencing

Por Doolette, Casey L., Gupta, Vadakattu V. S. R., Lu, Yang, Payne, Justin L., Batstone, Damien J., Kirby, Jason K., Navarro, Divina A., McLaughlin, Mike J.
Publicado no PLoS One (2016)

GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians

Por Gangiredla, Jayanthi, Rand, Hugh, Benisatto, Daniel, Payne, Justin, Strittmatter, Charles, Sanders, Jimmy, Wolfgang, William J., Libuit, Kevin, Herrick, James B., Prarat, Melanie, Toro, Magaly, Farrell, Thomas, Strain, Errol
Publicado no BMC Genomics (2021)

Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5− Strain Isolated from Chicken Breast

Por Hoffmann, Maria, Muruvanda, Tim, Allard, Marc W., Korlach, Jonas, Roberts, Richard J., Timme, Ruth, Payne, Justin, McDermott, Patrick F., Evans, Peter, Meng, Jianghong, Brown, Eric W., Zhao, Shaohua
Publicado em 2013

Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5− Strain Isolated from Chicken Breast

Por Hoffmann, Maria, Muruvanda, Tim, Allard, Marc W., Korlach, Jonas, Roberts, Richard J., Timme, Ruth, Payne, Justin, McDermott, Patrick F., Evans, Peter, Meng, Jianghong, Brown, Eric W., Zhao, Shaohua
Publicado em 2014

Complete Sequences of Six IncA/C Plasmids of Multidrug-Resistant Salmonella enterica subsp. enterica Serotype Newport

Por Cao, Guojie, Allard, Marc W., Hoffmann, Maria, Monday, Steven R., Muruvanda, Tim, Luo, Yan, Payne, Justin, Rump, Lydia, Meng, Kevin, Zhao, Shaohua, McDermott, Patrick F., Brown, Eric W., Meng, Jianghong
Publicado no Genome Announc (2015)

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Give, Isolated from an Imported Chili Powder Product

Por Wang, Hua, Chen, Yi, Ayers, Sherry, Melka, David, Laasri, Anna, Payne, Justin S., Zheng, Jie, Son, Insook, Timme, Ruth, Kastanis, George, Hammack, Thomas S., Strain, Errol, Allard, Marc W., Evans, Peter S., Brown, Eric W.
Publicado no Genome Announc (2015)

Phylogenetic and Biogeographic Patterns of Vibrio parahaemolyticus Strains from North America Inferred from Whole-Genome Sequence Data

Por Miller, John J., Weimer, Bart C., Timme, Ruth, Lüdeke, Catharina H. M., Pettengill, James B., Bandoy, D. J. Darwin, Weis, Allison M., Kaufman, James, Huang, B. Carol, Payne, Justin, Strain, Errol, Jones, Jessica L.
Publicado no Appl Environ Microbiol (2021)

Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica Serovars

Por Pirone-Davies, Cary, Hoffmann, Maria, Roberts, Richard J., Muruvanda, Tim, Timme, Ruth E., Strain, Errol, Luo, Yan, Payne, Justin, Luong, Khai, Song, Yi, Tsai, Yu-Chih, Boitano, Matthew, Clark, Tyson A., Korlach, Jonas, Evans, Peter S., Allard, Marc W.
Publicado no PLoS One (2015)

Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992

Por Allard, Marc W., Muruvanda, Tim, Strain, Errol, Timme, Ruth, Luo, Yan, Wang, Charles, Keys, Christine E., Payne, Justin, Cooper, Tony, Luong, Khai, Song, Yi, Chin, Chen-Shan, Korlach, Jonas, Roberts, Rich J., Evans, Peter, Musser, Steven M., Brown, Eric W.
Publicado em 2013

Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992

Por Allard, Marc W., Muruvanda, Tim, Strain, Errol, Timme, Ruth, Luo, Yan, Wang, Charles, Keys, Christine E., Payne, Justin, Cooper, Tony, Luong, Khai, Song, Yi, Chin, Chen-Shan, Korlach, Jonas, Roberts, Richard J., Evans, Peter, Musser, Steven M., Brown, Eric W.
Publicado em 2014