Distribution of single‐nucleotide variants on protein–protein interaction sites and its relationship with minor allele frequency

по Nishi, Hafumi, Nakata, Junichi, Kinoshita, Kengo
Опубликовано в: Protein Sci (2015)

Phosphorylation in protein-protein binding: effect on stability and function

по Nishi, Hafumi, Hashimoto, Kosuke, Panchenko, Anna R.
Опубликовано 2011

Physicochemical mechanisms of protein regulation by phosphorylation

по Nishi, Hafumi, Shaytan, Alexey, Panchenko, Anna R.
Опубликовано 2014

Crosstalk between signaling pathways provided by single and multiple protein phosphorylation sites

по Nishi, Hafumi, Demir, Emek, Panchenko, Anna R.
Опубликовано в: J Mol Biol (2014)

Caught in self-interaction: evolutionary and functional mechanisms of protein homooligomerization

по Hashimoto, Kosuke, Nishi, Hafumi, Bryant, Stephen, Panchenko, Anna R.
Опубликовано 2011

Evolutionary, Physicochemical, and Functional Mechanisms of Protein Homooligomerization

по Nishi, Hafumi, Hashimoto, Kosuke, Madej, Thomas, Panchenko, Anna R.
Опубликовано 2013

Structural characterization of single nucleotide variants at ligand binding sites and enzyme active sites of human proteins

по Yamada, Kazunori D., Nishi, Hafumi, Nakata, Junichi, Kinoshita, Kengo
Опубликовано в: Biophys Physicobiol (2016)

Identification of the sequence determinants of protein N-terminal acetylation through a decision tree approach

по Yamada, Kazunori D., Omori, Satoshi, Nishi, Hafumi, Miyagi, Masaru
Опубликовано в: BMC Bioinformatics (2017)

Dynamic recognition and linkage specificity in K63 di-ubiquitin and TAB2 NZF domain complex

по Moritsugu, Kei, Nishi, Hafumi, Inariyama, Keiichi, Kobayashi, Masanori, Kidera, Akinori
Опубликовано в: Sci Rep (2018)

Molecular mechanisms of disease-causing missense mutations

по Stefl, Shannon, Nishi, Hafumi, Petukh, Marharyta, Panchenko, Anna R., Alexov, Emil
Опубликовано 2013

Regulation of protein-protein binding by coupling between phosphorylation and intrinsic disorder: analysis of human protein complexes

по Nishi, Hafumi, Fong, Jessica, Chang, Christiana, Teichmann, Sarah A., Panchenko, Anna R.
Опубликовано 2013

Cancer Missense Mutations Alter Binding Properties of Proteins and Their Interaction Networks

по Nishi, Hafumi, Tyagi, Manoj, Teng, Shaolei, Shoemaker, Benjamin A., Hashimoto, Kosuke, Alexov, Emil, Wuchty, Stefan, Panchenko, Anna R.
Опубликовано 2013

New tools and functions in data‐out activities at Protein Data Bank Japan (PDBj)

по Kinjo, Akira R., Bekker, Gert‐Jan, Wako, Hiroshi, Endo, Shigeru, Tsuchiya, Yuko, Sato, Hiromu, Nishi, Hafumi, Kinoshita, Kengo, Suzuki, Hirofumi, Kawabata, Takeshi, Yokochi, Masashi, Iwata, Takeshi, Kobayashi, Naohiro, Fujiwara, Toshimichi, Kurisu, Genji, Nakamura, Haruki
Опубликовано в: Protein Sci (2017)

H255Y and K508R missense mutations in tumour suppressor folliculin (FLCN) promote kidney cell proliferation

по Hasumi, Hisashi, Hasumi, Yukiko, Baba, Masaya, Nishi, Hafumi, Furuya, Mitsuko, Vocke, Cathy D., Lang, Martin, Irie, Nobuko, Esumi, Chiharu, Merino, Maria J., Kawahara, Takashi, Isono, Yasuhiro, Makiyama, Kazuhide, Warner, Andrew C., Haines, Diana C., Wei, Ming-Hui, Zbar, Berton, Hagenau, Herbert, Feigenbaum, Lionel, Kondo, Keiichi, Nakaigawa, Noboru, Yao, Masahiro, Metwalli, Adam R., Marston Linehan, W., Schmidt, Laura S.
Опубликовано в: Hum Mol Genet (2017)