Finding enzyme cofactors in Protein Data Bank

অনুযায়ী Mukhopadhyay, Abhik, Borkakoti, Neera, Pravda, Lukáš, Tyzack, Jonathan D, Thornton, Janet M, Velankar, Sameer
প্রকাশিত Bioinformatics (2019)

Automatic annotation of protein residues in published papers

অনুযায়ী Firth, Robert, Talo, Francesco, Venkatesan, Aravind, Mukhopadhyay, Abhik, McEntyre, Johanna, Velankar, Sameer, Morris, Chris
প্রকাশিত Acta Crystallogr F Struct Biol Commun (2019)

Characterization of a versatile organometallic pro-drug (CORM) for experimental CO based therapeutics

অনুযায়ী Seixas, João D., Mukhopadhyay, Abhik, Santos-Silva, Teresa, Otterbein, Leo E, Gallo, David J., Rodrigues, Sandra S., Guerreiro, Bruno H., Gonçalves, Ana M. L., Penacho, Nuno, Marques, Ana R., Coelho, Ana C., Reis, Patrícia M., Romão, Maria J., Romão, Carlos C.
প্রকাশিত 2013

PDBe: towards reusable data delivery infrastructure at protein data bank in Europe

অনুযায়ী Mir, Saqib, Alhroub, Younes, Anyango, Stephen, Armstrong, David R, Berrisford, John M, Clark, Alice R, Conroy, Matthew J, Dana, Jose M, Deshpande, Mandar, Gupta, Deepti, Gutmanas, Aleksandras, Haslam, Pauline, Mak, Lora, Mukhopadhyay, Abhik, Nadzirin, Nurul, Paysan-Lafosse, Typhaine, Sehnal, David, Sen, Sanchayita, Smart, Oliver S, Varadi, Mihaly, Kleywegt, Gerard J, Velankar, Sameer
প্রকাশিত Nucleic Acids Res (2018)

Small molecule annotation for the Protein Data Bank

অনুযায়ী Sen, Sanchayita, Young, Jasmine, Berrisford, John M., Chen, Minyu, Conroy, Matthew J., Dutta, Shuchismita, Di Costanzo, Luigi, Gao, Guanghua, Ghosh, Sutapa, Hudson, Brian P., Igarashi, Reiko, Kengaku, Yumiko, Liang, Yuhe, Peisach, Ezra, Persikova, Irina, Mukhopadhyay, Abhik, Narayanan, Buvaneswari Coimbatore, Sahni, Gaurav, Sato, Junko, Sekharan, Monica, Shao, Chenghua, Tan, Lihua, Zhuravleva, Marina A.
প্রকাশিত Database (Oxford) (2014)

PDBe: Protein Data Bank in Europe

অনুযায়ী Gutmanas, Aleksandras, Alhroub, Younes, Battle, Gary M., Berrisford, John M., Bochet, Estelle, Conroy, Matthew J., Dana, Jose M., Fernandez Montecelo, Manuel A., van Ginkel, Glen, Gore, Swanand P., Haslam, Pauline, Hatherley, Rowan, Hendrickx, Pieter M.S., Hirshberg, Miriam, Lagerstedt, Ingvar, Mir, Saqib, Mukhopadhyay, Abhik, Oldfield, Thomas J., Patwardhan, Ardan, Rinaldi, Luana, Sahni, Gaurav, Sanz-García, Eduardo, Sen, Sanchayita, Slowley, Robert A., Velankar, Sameer, Wainwright, Michael E., Kleywegt, Gerard J.
প্রকাশিত 2014

PDBe: improved findability of macromolecular structure data in the PDB

অনুযায়ী Armstrong, David R, Berrisford, John M, Conroy, Matthew J, Gutmanas, Aleksandras, Anyango, Stephen, Choudhary, Preeti, Clark, Alice R, Dana, Jose M, Deshpande, Mandar, Dunlop, Roisin, Gane, Paul, Gáborová, Romana, Gupta, Deepti, Haslam, Pauline, Koča, Jaroslav, Mak, Lora, Mir, Saqib, Mukhopadhyay, Abhik, Nadzirin, Nurul, Nair, Sreenath, Paysan-Lafosse, Typhaine, Pravda, Lukas, Sehnal, David, Salih, Osman, Smart, Oliver, Tolchard, James, Varadi, Mihaly, Svobodova-Vařeková, Radka, Zaki, Hossam, Kleywegt, Gerard J, Velankar, Sameer
প্রকাশিত Nucleic Acids Res (2020)

Validation of Structures in the Protein Data Bank

অনুযায়ী Gore, Swanand, Sanz García, Eduardo, Hendrickx, Pieter M.S., Gutmanas, Aleksandras, Westbrook, John D., Yang, Huanwang, Feng, Zukang, Baskaran, Kumaran, Berrisford, John M., Hudson, Brian P., Ikegawa, Yasuyo, Kobayashi, Naohiro, Lawson, Catherine L., Mading, Steve, Mak, Lora, Mukhopadhyay, Abhik, Oldfield, Thomas J., Patwardhan, Ardan, Peisach, Ezra, Sahni, Gaurav, Sekharan, Monica R., Sen, Sanchayita, Shao, Chenghua, Smart, Oliver S., Ulrich, Eldon L., Yamashita, Reiko, Quesada, Martha, Young, Jasmine Y., Nakamura, Haruki, Markley, John L., Berman, Helen M., Burley, Stephen K., Velankar, Sameer, Kleywegt, Gerard J.
প্রকাশিত Structure (2017)

PDBe: improved accessibility of macromolecular structure data from PDB and EMDB

অনুযায়ী Velankar, Sameer, van Ginkel, Glen, Alhroub, Younes, Battle, Gary M., Berrisford, John M., Conroy, Matthew J., Dana, Jose M., Gore, Swanand P., Gutmanas, Aleksandras, Haslam, Pauline, Hendrickx, Pieter M. S., Lagerstedt, Ingvar, Mir, Saqib, Fernandez Montecelo, Manuel A., Mukhopadhyay, Abhik, Oldfield, Thomas J., Patwardhan, Ardan, Sanz-García, Eduardo, Sen, Sanchayita, Slowley, Robert A., Wainwright, Michael E., Deshpande, Mandar S., Iudin, Andrii, Sahni, Gaurav, Salavert Torres, Jose, Hirshberg, Miriam, Mak, Lora, Nadzirin, Nurul, Armstrong, David R., Clark, Alice R., Smart, Oliver S., Korir, Paul K., Kleywegt, Gerard J.
প্রকাশিত Nucleic Acids Res (2016)

OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive

অনুযায়ী Young, Jasmine Y., Westbrook, John D., Feng, Zukang, Sala, Raul, Peisach, Ezra, Oldfield, Thomas J., Sen, Sanchayita, Gutmanas, Aleksandras, Armstrong, David R., Berrisford, John M., Chen, Li, Chen, Minyu, Di Costanzo, Luigi, Dimitropoulos, Dimitris, Gao, Guanghua, Ghosh, Sutapa, Gore, Swanand, Guranovic, Vladimir, Hendrickx, Pieter MS, Hudson, Brian P., Igarashi, Reiko, Ikegawa, Yasuyo, Kobayashi, Naohiro, Lawson, Catherine L., Liang, Yuhe, Mading, Steve, Mak, Lora, Mir, M. Saqib, Mukhopadhyay, Abhik, Patwardhan, Ardan, Persikova, Irina, Rinaldi, Luana, Sanz-Garcia, Eduardo, Sekharan, Monica R., Shao, Chenghua, Swaminathan, G. Jawahar, Tan, Lihua, Ulrich, Eldon L., van Ginkel, Glen, Yamashita, Reiko, Yang, Huanwang, Zhuravleva, Marina A., Quesada, Martha, Kleywegt, Gerard J., Berman, Helen M., Markley, John L., Nakamura, Haruki, Velankar, Sameer, Burley, Stephen K.
প্রকাশিত Structure (2017)

Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data

অনুযায়ী Young, Jasmine Y, Westbrook, John D, Feng, Zukang, Peisach, Ezra, Persikova, Irina, Sala, Raul, Sen, Sanchayita, Berrisford, John M, Swaminathan, G Jawahar, Oldfield, Thomas J, Gutmanas, Aleksandras, Igarashi, Reiko, Armstrong, David R, Baskaran, Kumaran, Chen, Li, Chen, Minyu, Clark, Alice R, Di Costanzo, Luigi, Dimitropoulos, Dimitris, Gao, Guanghua, Ghosh, Sutapa, Gore, Swanand, Guranovic, Vladimir, Hendrickx, Pieter M S, Hudson, Brian P, Ikegawa, Yasuyo, Kengaku, Yumiko, Lawson, Catherine L, Liang, Yuhe, Mak, Lora, Mukhopadhyay, Abhik, Narayanan, Buvaneswari, Nishiyama, Kayoko, Patwardhan, Ardan, Sahni, Gaurav, Sanz-García, Eduardo, Sato, Junko, Sekharan, Monica R, Shao, Chenghua, Smart, Oliver S, Tan, Lihua, van Ginkel, Glen, Yang, Huanwang, Zhuravleva, Marina A, Markley, John L, Nakamura, Haruki, Kurisu, Genji, Kleywegt, Gerard J, Velankar, Sameer, Berman, Helen M, Burley, Stephen K
প্রকাশিত Database (Oxford) (2018)