minet: A R/Bioconductor Package for Inferring Large Transcriptional Networks Using Mutual Information

av Meyer, Patrick E, Lafitte, Frédéric, Bontempi, Gianluca
Publicerad 2008

On the Impact of Entropy Estimation on Transcriptional Regulatory Network Inference Based on Mutual Information

av Olsen, Catharina, Meyer, Patrick E, Bontempi, Gianluca
Publicerad 2008

Information-Theoretic Inference of Large Transcriptional Regulatory Networks

av Meyer, Patrick E, Kontos, Kevin, Lafitte, Frederic, Bontempi, Gianluca
Publicerad 2007

NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference

av Bellot, Pau, Olsen, Catharina, Salembier, Philippe, Oliveras-Vergés, Albert, Meyer, Patrick E.
I publikationen BMC Bioinformatics (2015)

Study of Meta-analysis strategies for network inference using information-theoretic approaches

av Pham, Ngoc C., Haibe-Kains, Benjamin, Bellot, Pau, Bontempi, Gianluca, Meyer, Patrick E.
I publikationen BioData Min (2017)

Using a Structural Root System Model to Evaluate and Improve the Accuracy of Root Image Analysis Pipelines

av Lobet, Guillaume, Koevoets, Iko T., Noll, Manuel, Meyer, Patrick E., Tocquin, Pierre, Pagès, Loïc, Périlleux, Claire
I publikationen Front Plant Sci (2017)

Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies

av Atkinson, Jonathan A., Lobet, Guillaume, Noll, Manuel, Meyer, Patrick E., Griffiths, Marcus, Wells, Darren M.
I publikationen Gigascience (2017)

Erratum to: Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies

av Atkinson, Jonathan A, Lobet, Guillaume, Noll, Manuel, Meyer, Patrick E, Griffiths, Marcus, Wells, Darren M
I publikationen Gigascience (2018)

Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks

av Marbach, Daniel, Roy, Sushmita, Ay, Ferhat, Meyer, Patrick E., Candeias, Rogerio, Kahveci, Tamer, Bristow, Christopher A., Kellis, Manolis
Publicerad 2012

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

av Roy, Sushmita, Ernst, Jason, Kharchenko, Peter V., Kheradpour, Pouya, Negre, Nicolas, Eaton, Matthew L., Landolin, Jane M., Bristow, Christopher A., Ma, Lijia, Lin, Michael F., Washietl, Stefan, Arshinoff, Bradley I., Ay, Ferhat, Meyer, Patrick E., Robine, Nicolas, Washington, Nicole L., Di Stefano, Luisa, Berezikov, Eugene, Brown, Christopher D., Candeias, Rogerio, Carlson, Joseph W., Carr, Adrian, Jungreis, Irwin, Marbach, Daniel, Sealfon, Rachel, Tolstorukov, Michael Y., Will, Sebastian, Alekseyenko, Artyom A., Artieri, Carlo, Booth, Benjamin W., Brooks, Angela N., Dai, Qi, Davis, Carrie A., Duff, Michael O., Feng, Xin, Gorchakov, Andrey A., Gu, Tingting, Henikoff, Jorja G., Kapranov, Philipp, Li, Renhua, MacAlpine, Heather K., Malone, John, Minoda, Aki, Nordman, Jared, Okamura, Katsutomo, Perry, Marc, Powell, Sara K., Riddle, Nicole C., Sakai, Akiko, Samsonova, Anastasia, Sandler, Jeremy E., Schwartz, Yuri B., Sher, Noa, Spokony, Rebecca, Sturgill, David, van Baren, Marijke, Wan, Kenneth H., Yang, Li, Yu, Charles, Feingold, Elise, Good, Peter, Guyer, Mark, Lowdon, Rebecca, Ahmad, Kami, Andrews, Justen, Berger, Bonnie, Brenner, Steven E., Brent, Michael R., Cherbas, Lucy, Elgin, Sarah C. R., Gingeras, Thomas R., Grossman, Robert, Hoskins, Roger A., Kaufman, Thomas C., Kent, William, Kuroda, Mitzi I., Orr-Weaver, Terry, Perrimon, Norbert, Pirrotta, Vincenzo, Posakony, James W., Ren, Bing, Russell, Steven, Cherbas, Peter, Graveley, Brenton R., Lewis, Suzanna, Micklem, Gos, Oliver, Brian, Park, Peter J., Celniker, Susan E., Henikoff, Steven, Karpen, Gary H., Lai, Eric C., MacAlpine, David M., Stein, Lincoln D., White, Kevin P., Kellis, Manolis
Publicerad 2010