Macromolecular crowding has opposite effects on two critical sub-steps of transcription initiation

od Mukherjee, Pratip, Mazumder, Abhishek
Wydane w FEBS Lett (2024)

Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms

od Mazumder, Abhishek, Kapanidis, Achillefs N.
Wydane w J Mol Biol (2019)

Isolation and characterization of two virulent Aeromonads associated with haemorrhagic septicaemia and tail-rot disease in farmed climbing perch Anabas testudineus

od Mazumder, Abhishek, Choudhury, Hrishikesh, Dey, Abhinit, Sarma, Dandadhar
Wydane w Sci Rep (2021)

Closing and opening of the RNA polymerase trigger loop

od Mazumder, Abhishek, Lin, Miaoxin, Kapanidis, Achillefs N., Ebright, Richard H.
Wydane w Proc Natl Acad Sci U S A (2020)

RNA polymerase clamp conformational dynamics: long-lived states and modulation by crowding, cations, and nonspecific DNA binding

od Mazumder, Abhishek, Wang, Anna, Uhm, Heesoo, Ebright, Richard H, Kapanidis, Achillefs N
Wydane w Nucleic Acids Res (2021)

Characterization of OglDREB2A gene from African rice (Oryza glaberrima), comparative analysis and its transcriptional regulation under salinity stress

od Gumi, Abubakar Mohammad, Guha, Pritam Kanti, Mazumder, Abhishek, Jayaswal, Pawan, Mondal, Tapan Kumar
Wydane w 3 Biotech (2018)

The RNA polymerase clamp interconverts dynamically among three states and is stabilized in a partly closed state by ppGpp

od Duchi, Diego, Mazumder, Abhishek, Malinen, Anssi M, Ebright, Richard H, Kapanidis, Achillefs N
Wydane w Nucleic Acids Res (2018)

Confinement-Free Wide-Field Ratiometric Tracking of Single Fluorescent Molecules

od Gilboa, Barak, Jing, Bo, Cui, Tao J., Sow, Maabur, Plochowietz, Anne, Mazumder, Abhishek, Kapanidis, Achillefs N.
Wydane w Biophys J (2019)

A Genetic Network That Balances Two Outcomes Utilizes Asymmetric Recognition of Operator Sites

od Mazumder, Abhishek, Bandyopadhyay, Sumita, Dhar, Amlanjyoti, Lewis, Dale E.A., Deb, Sunanda, Dey, Sucharita, Chakrabarti, Pinak, Roy, Siddhartha
Wydane 2012

Site-specific incorporation of probes into RNA polymerase by unnatural-amino-acid mutagenesis and Staudinger-Bertozzi ligation

od Chakraborty, Anirban, Mazumder, Abhishek, Lin, Miaoxin, Hasemeyer, Adam, Xu, Qumiao, Wang, Dongye, Ebright, Yon W., Ebright, Richard H.
Wydane w Methods Mol Biol (2015)

STRUCTURAL BASIS OF TRANSCRIPTION INHIBITION BY FIDAXOMICIN (LIPIARMYCIN A3)

od Lin, Wei, Das, Kalyan, Degen, David, Mazumder, Abhishek, Duchi, Diego, Wang, Dongye, Ebright, Yon W., Ebright, Richard Y., Sineva, Elena, Gigliotti, Matthew, Srivastava, Aashish, Mandal, Sukhendu, Jiang, Yi, Liu, Yu, Yin, Ruiheng, Zhang, Zhening, Eng, Edward T., Thomas, Dennis, Donadio, Stefano, Zhang, Haibo, Zhang, Changsheng, Kapanidis, Achillefs N., Ebright, Richard H.
Wydane w Mol Cell (2018)