Detection of atypical genes in virus families using a one-class SVM

Por Metzler, Saskia, Kalinina, Olga V
Publicado em 2014

Modelling binding between CCR5 and CXCR4 receptors and their ligands suggests the surface electrostatic potential of the co-receptor to be a key player in the HIV-1 tropism

Por Kalinina, Olga V, Pfeifer, Nico, Lengauer, Thomas
Publicado em 2013

Harry Potter and the structural biologist's (Key)stone

Por Devos, Damien, Kalinina, Olga V, Russell, Robert B
Publicado em 2006

Combining specificity determining and conserved residues improves functional site prediction

Por Kalinina, Olga V, Gelfand, Mikhail S, Russell, Robert B
Publicado em 2009

Sequence and Structure Analysis of Distantly-Related Viruses Reveals Extensive Gene Transfer between Viruses and Hosts and among Viruses

Por Caprari, Silvia, Metzler, Saskia, Lengauer, Thomas, Kalinina, Olga V.
Publicado no Viruses (2015)

Combinations of Protein-Chemical Complex Structures Reveal New Targets for Established Drugs

Por Kalinina, Olga V., Wichmann, Oliver, Apic, Gordana, Russell, Robert B.
Publicado em 2011

ProtChemSI: a network of protein–chemical structural interactions

Por Kalinina, Olga V., Wichmann, Oliver, Apic, Gordana, Russell, Robert B.
Publicado em 2012

Common and specific amino acid residues in the prokaryotic polypeptide release factors RF1 and RF2: possible functional implications

Por Oparina, Nina J., Kalinina, Olga V., Gelfand, Mikhail S., Kisselev, Lev L.
Publicado em 2005

Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families

Por Kalinina, Olga V., Mironov, Andrey A., Gelfand, Mikhail S., Rakhmaninova, Aleksandra B.
Publicado em 2004

StructMAn: annotation of single-nucleotide polymorphisms in the structural context

Por Gress, Alexander, Ramensky, Vasily, Büch, Joachim, Keller, Andreas, Kalinina, Olga V.
Publicado no Nucleic Acids Res (2016)

SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins

Por Kalinina, Olga V., Novichkov, Pavel S., Mironov, Andrey A., Gelfand, Mikhail S., Rakhmaninova, Aleksandra B.
Publicado em 2004

Computational Identification of Novel Amino-Acid Interactions in HIV Gag via Correlated Evolution

Por Kalinina, Olga V., Oberwinkler, Heike, Glass, Bärbel, Kräusslich, Hans-Georg, Russell, Robert B., Briggs, John A. G.
Publicado em 2012

BALL-SNP: combining genetic and structural information to identify candidate non-synonymous single nucleotide polymorphisms

Por Mueller, Sabine C., Backes, Christina, Kalinina, Olga V., Meder, Benjamin, Stöckel, Daniel, Lenhof, Hans-Peter, Meese, Eckart, Keller, Andreas
Publicado no Genome Med (2015)

Systematic discovery of linear binding motifs targeting an ancient protein interaction surface on MAP kinases

Por Zeke, András, Bastys, Tomas, Alexa, Anita, Garai, Ágnes, Mészáros, Bálint, Kirsch, Klára, Dosztányi, Zsuzsanna, Kalinina, Olga V, Reményi, Attila
Publicado no Mol Syst Biol (2015)

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies

Por Rakhmaninova Aleksandra B, Mironov Andrey A, Gelfand Mikhail S, Mazin Pavel V, Rubinov Anatoly R, Russell Robert B, Kalinina Olga V
Publicado em 2010-07-01

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies

Por Mazin, Pavel V, Gelfand, Mikhail S, Mironov, Andrey A, Rakhmaninova, Aleksandra B, Rubinov, Anatoly R, Russell, Robert B, Kalinina, Olga V
Publicado em 2010

Large oligomeric complex structures can be computationally assembled by efficiently combining docked interfaces

Por Dietzen, Matthias, Kalinina, Olga V., Taškova, Katerina, Kneissl, Benny, Hildebrandt, Anna‐Katharina, Jaenicke, Elmar, Decker, Heinz, Lengauer, Thomas, Hildebrandt, Andreas
Publicado no Proteins (2015)