Mapping whole genome shotgun sequence and variant calling in mammalian species without their reference genomes

Por Kalbfleisch, Ted, Heaton, Michael P
Publicado em 2014

A MicroRNA Gene is Hosted in an Intron of a Schizophrenia-susceptibility Gene

Por Zhu, Yanglong, Kalbfleisch, Ted, Brennan, Mark D., Li, Yong
Publicado em 2009

Assessment of genetic variation for the LINE-1 retrotransposon from next generation sequence data

Por Rouchka, Eric, Montoya-Durango, Diego E, Stribinskis, Vilius, Ramos, Kenneth, Kalbfleisch, Ted
Publicado em 2010

Characterization of an APC Promoter 1B deletion in a Patient Diagnosed with Familial Adenomatous Polyposis via Whole Genome Shotgun Sequencing

Por Kalbfleisch, Ted, Brock, Pamela, Snow, Angela, Neklason, Deborah, Gowans, Gordon, Klein, Jon
Publicado no F1000Res (2015)

Characterization of Ovine Nectin-4, a Novel Peste des Petits Ruminants Virus Receptor

Por Birch, Jamie, Juleff, Nicholas, Heaton, Michael P., Kalbfleisch, Ted, Kijas, James, Bailey, Dalan
Publicado em 2013

The miR-29 transcriptome in endocrine-sensitive and resistant breast cancer cells

Por Muluhngwi, Penn, Alizadeh-Rad, Negin, Vittitow, Stephany L., Kalbfleisch, Ted S., Klinge, Carolyn M.
Publicado no Sci Rep (2017)

Computational and Biological Inference of Gene Regulatory Networks of LINE-1 Retrotransposon

Por Ramos, Kenneth S., He, Qiang, Kalbfleisch, Ted, Montoya-Durango, Diego E, Teneng, Ivo, Stribinskis, Vilius, Brun, Marcel
Publicado em 2007

Epigenetic Control of Mammalian LINE-1 Retrotransposon by Retinoblastoma Proteins

Por Montoya-Durango, Diego E., Liu, Yongqing, Teneng, Ivo, Kalbfleisch, Ted, Lacy, Mary E., Steffen, Marlene C., Ramos, Kenneth S.
Publicado em 2009

Comparison of the Equine Reference Sequence with Its Sanger Source Data and New Illumina Reads

Por Rebolledo-Mendez, Jovan, Hestand, Matthew S., Coleman, Stephen J., Zeng, Zheng, Orlando, Ludovic, MacLeod, James N., Kalbfleisch, Ted
Publicado no PLoS One (2015)

Interaction Among Variant Vascular Endothelial Growth Factor (VEGF) and Its Receptor in Relation to Prostate Cancer Risk

Por VanCleave, Tiva T., Moore, Jason H., Benford, Marnita L., Brock, Guy N., Kalbfleisch, Ted, Baumgartner, Richard N., Lillard, James W., Kittles, Rick A., Kidd, La Creis R.
Publicado no Prostate (2010)

Allelic Variation in CXCL16 Determines CD3(+) T Lymphocyte Susceptibility to Equine Arteritis Virus Infection and Establishment of Long-Term Carrier State in the Stallion

Por Sarkar, Sanjay, Bailey, Ernest, Go, Yun Young, Cook, R. Frank, Kalbfleisch, Ted, Eberth, John, Chelvarajan, R. Lakshman, Shuck, Kathleen M., Artiushin, Sergey, Timoney, Peter J., Balasuriya, Udeni B. R.
Publicado no PLoS Genet (2016)

Nuclear respiratory factor-1 and bioenergetics in tamoxifen-resistant breast cancer cells

Por Radde, Brandie N., Ivanova, Margarita M., Mai, Huy Xuan, Alizadeh-Rad, Negin, Piell, Kellianne, Van Hoose, Patrick, Cole, Marsha P., Muluhngwi, Penn, Kalbfleisch, Ted S., Rouchka, Eric C., Hill, Bradford G., Klinge, Carolyn M.
Publicado no Exp Cell Res (2016)

Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds

Por Schaefer, Robert J., Schubert, Mikkel, Bailey, Ernest, Bannasch, Danika L., Barrey, Eric, Bar-Gal, Gila Kahila, Brem, Gottfried, Brooks, Samantha A., Distl, Ottmar, Fries, Ruedi, Finno, Carrie J., Gerber, Vinzenz, Haase, Bianca, Jagannathan, Vidhya, Kalbfleisch, Ted, Leeb, Tosso, Lindgren, Gabriella, Lopes, Maria Susana, Mach, Núria, da Câmara Machado, Artur, MacLeod, James N., McCoy, Annette, Metzger, Julia, Penedo, Cecilia, Polani, Sagi, Rieder, Stefan, Tammen, Imke, Tetens, Jens, Thaller, Georg, Verini-Supplizi, Andrea, Wade, Claire M., Wallner, Barbara, Orlando, Ludovic, Mickelson, James R., McCue, Molly E.
Publicado no BMC Genomics (2017)

Prehistoric genomes reveal the genetic foundation and cost of horse domestication

Por Schubert, Mikkel, Jónsson, Hákon, Chang, Dan, Der Sarkissian, Clio, Ermini, Luca, Ginolhac, Aurélien, Albrechtsen, Anders, Dupanloup, Isabelle, Foucal, Adrien, Petersen, Bent, Fumagalli, Matteo, Raghavan, Maanasa, Seguin-Orlando, Andaine, Korneliussen, Thorfinn S., Velazquez, Amhed M. V., Stenderup, Jesper, Hoover, Cindi A., Rubin, Carl-Johan, Alfarhan, Ahmed H., Alquraishi, Saleh A., Al-Rasheid, Khaled A. S., MacHugh, David E., Kalbfleisch, Ted, MacLeod, James N., Rubin, Edward M., Sicheritz-Ponten, Thomas, Andersson, Leif, Hofreiter, Michael, Marques-Bonet, Tomas, Gilbert, M. Thomas P., Nielsen, Rasmus, Excoffier, Laurent, Willerslev, Eske, Shapiro, Beth, Orlando, Ludovic
Publicado no Proc Natl Acad Sci U S A (2014)