Clustering of genes into regulons using integrated modeling-COGRIM

Por Chen, Guang, Jensen, Shane T, Stoeckert, Christian J
Publicado em 2007

A Bayesian approach to efficient differential allocation for resampling-based significance testing

Por Jensen, Shane T, Soi, Sameer, Wang, Li-San
Publicado em 2009

Transcriptional regulation via TF-modifying enzymes: an integrative model-based analysis

Por Everett, Logan J., Jensen, Shane T., Hannenhalli, Sridhar
Publicado em 2011

Cis-regulatory modules in the mammalian liver: composition depends on strength of Foxa2 consensus site

Por Tuteja, Geetu, Jensen, Shane T., White, Peter, Kaestner, Klaus H.
Publicado em 2008

A spatially varying two-sample recombinant coalescent, with applications to HIV escape response

Por Braunstein, Alexander, Jensen, Shane T., Wei, Zhi, McAuliffe, Jon D.
Publicado em 2008

A transcription factor affinity-based code for mammalian transcription initiation

Por Megraw, Molly, Pereira, Fernando, Jensen, Shane T., Ohler, Uwe, Hatzigeorgiou, Artemis G.
Publicado em 2009

Statistical Learning with Time Series Dependence: An Application to Scoring Sleep in Mice

Por McShane, Blakeley B., Jensen, Shane T., Pack, Allan I., Wyner, Abraham J.
Publicado em 2013

Mouse Label-Retaining Cells Are Molecularly And Functionally Distinct From Reserve Intestinal Stem Cells

Por Li, Ning, Nakauka-Ddamba, Angela, Tobias, John, Jensen, Shane T., Lengner, Christopher J.
Publicado no Gastroenterology (2016)

MicroRNA promoter element discovery in Arabidopsis

Por Megraw, Molly, Baev, Vesselin, Rusinov, Ventsislav, Jensen, Shane T., Kalantidis, Kriton, Hatzigeorgiou, Artemis G.
Publicado em 2006

Mapping structural landmarks, ligand binding sites and missense mutations to the collagen IV heterotrimers predicts major functional domains, novel interactions and variation in ph...

Por Des Parkin, J., San Antonio, James D., Pedchenko, Vadim, Hudson, Billy, Jensen, Shane T., Savige, Judy
Publicado no Hum Mutat (2011)

Characterization of the bout durations of sleep and wakefulness

Por McShane, Blakeley B., Galante, Raymond J., Jensen, Shane T., Naidoo, Nirinjini, Pack, Allan I., Wyner, Abraham
Publicado em 2010

Assessing REM Sleep in Mice Using Video Data

Por McShane, Blakeley B., Galante, Raymond J., Biber, Michael, Jensen, Shane T., Wyner, Abraham J., Pack, Allan I.
Publicado em 2012

Switching between raltegravir resistance pathways analyzed by deep sequencing

Por Mukherjee, Rithun, Jensen, Shane T., Male, Frances, Bittinger, Kyle, Hodinka, Richard L., Miller, Michael D., Bushman, Frederic D.
Publicado em 2011

Systems biology-defined NF-κB regulons, interacting signal pathways and networks are implicated in the malignant phenotype of head and neck cancer cell lines differing in p53 statu...

Por Yan, Bin, Chen, Guang, Saigal, Kunal, Yang, Xinping, Jensen, Shane T, Van Waes, Carter, Stoeckert, Christian J, Chen, Zhong
Publicado em 2008

Dinosaur Peptides Suggest Mechanisms of Protein Survival

Por San Antonio, James D., Schweitzer, Mary H., Jensen, Shane T., Kalluri, Raghu, Buckley, Michael, Orgel, Joseph P. R. O.
Publicado em 2011

Heterogeneity in readouts of canonical Wnt pathway activity within intestinal crypts

Por Li, Ning, Yousefi, Maryam, Nakauka-Ddamba, Angela, Tobias, John W., Jensen, Shane T., Morrisey, Edward E., Lengner, Christopher J.
Publicado no Dev Dyn (2016)

Single-Cell Analysis of Proxy Reporter Allele-Marked Epithelial Cells Establishes Intestinal Stem Cell Hierarchy

Por Li, Ning, Yousefi, Maryam, Nakauka-Ddamba, Angela, Jain, Rajan, Tobias, John, Epstein, Jonathan A., Jensen, Shane T., Lengner, Christopher J.
Publicado no Stem Cell Reports (2014)

Bayesian integration of genetics and epigenetics detects causal regulatory SNPs underlying expression variability

Por Das, Avinash, Morley, Michael, Moravec, Christine S., Tang, W. H. W., Hakonarson, Hakon, Margulies, Kenneth B., Cappola, Thomas P., Jensen, Shane, Hannenhalli, Sridhar
Publicado no Nat Commun (2015)

Msi RNA-binding proteins control reserve intestinal stem cell quiescence

Por Yousefi, Maryam, Li, Ning, Nakauka-Ddamba, Angela, Wang, Shan, Davidow, Kimberly, Schoenberger, Jenna, Yu, Zhengquan, Jensen, Shane T., Kharas, Michael G., Lengner, Christopher J.
Publicado no J Cell Biol (2016)

The Program of Gene Transcription for a Single Differentiating Cell Type during Sporulation in Bacillus subtilis

Por Eichenberger, Patrick, Fujita, Masaya, Jensen, Shane T, Conlon, Erin M, Rudner, David Z, Wang, Stephanie T, Ferguson, Caitlin, Haga, Koki, Sato, Tsutomu, Liu, Jun S, Losick, Richard
Publicado em 2004