Fast Gene Ontology based clustering for microarray experiments

Por Ovaska, Kristian, Laakso, Marko, Hautaniemi, Sampsa
Publicado em 2008

Anima: Modular Workflow System for Comprehensive Image Data Analysis

Por Rantanen, Ville, Valori, Miko, Hautaniemi, Sampsa
Publicado em 2014

Data Integration Workflow for Search of Disease Driving Genes and Genetic Variants

Por Karinen, Sirkku, Heikkinen, Tuomas, Nevanlinna, Heli, Hautaniemi, Sampsa
Publicado em 2011

Biclustering Methods: Biological Relevance and Application in Gene Expression Analysis

Por Oghabian, Ali, Kilpinen, Sami, Hautaniemi, Sampsa, Czeizler, Elena
Publicado em 2014

Language-Agnostic Reproducible Data Analysis Using Literate Programming

Por Vassilev, Boris, Louhimo, Riku, Ikonen, Elina, Hautaniemi, Sampsa
Publicado no PLoS One (2016)

Integrated mechanistic and data-driven modelling for multivariate analysis of signalling pathways

Por Hua, Fei, Hautaniemi, Sampsa, Yokoo, Rayka, Lauffenburger, Douglas A
Publicado em 2006

Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks

Por Lähdesmäki, Harri, Hautaniemi, Sampsa, Shmulevich, Ilya, Yli-Harja, Olli
Publicado em 2006

Comprehensive exon array data processing method for quantitative analysis of alternative spliced variants

Por Chen, Ping, Lepikhova, Tatiana, Hu, Yizhou, Monni, Outi, Hautaniemi, Sampsa
Publicado em 2011

Identification of sample-specific regulations using integrative network level analysis

Por Liu, Chengyu, Louhimo, Riku, Laakso, Marko, Lehtonen, Rainer, Hautaniemi, Sampsa
Publicado no BMC Cancer (2015)

Advanced analysis and visualization of gene copy number and expression data

Por Hautaniemi Sampsa, Järvinen Anna-Kaarina, Saarela Matti, Autio Reija, Astola Jaakko
Publicado em 2009-01-01

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks

Por Wolf-Yadlin, Alejandro, Hautaniemi, Sampsa, Lauffenburger, Douglas A., White, Forest M.
Publicado em 2007

Advanced analysis and visualization of gene copy number and expression data

Por Autio, Reija, Saarela, Matti, Järvinen, Anna-Kaarina, Hautaniemi, Sampsa, Astola, Jaakko
Publicado em 2009

Origins and impacts of new mammalian exons

Por Merkin, Jason, Chen, Ping, Alexis, Maria, Hautaniemi, Sampsa, Burge, Christopher B.
Publicado no Cell Rep (2015)

Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations

Por Autio, Reija, Kilpinen, Sami, Saarela, Matti, Kallioniemi, Olli, Hautaniemi, Sampsa, Astola, Jaakko
Publicado em 2009

Integrated data management and validation platform for phosphorylated tandem mass spectrometry data

Por Lahesmaa-Korpinen, Anna-Maria, Carlson, Scott M., White, Forest M., Hautaniemi, Sampsa
Publicado em 2010

SePIA: RNA and small RNA sequence processing, integration, and analysis

Por Icay, Katherine, Chen, Ping, Cervera, Alejandra, Rantanen, Ville, Lehtonen, Rainer, Hautaniemi, Sampsa
Publicado no BioData Min (2016)

Data integration to prioritize drugs using genomics and curated data

Por Louhimo, Riku, Laakso, Marko, Belitskin, Denis, Klefström, Juha, Lehtonen, Rainer, Hautaniemi, Sampsa
Publicado no BioData Min (2016)

High-Resolution Genomic and Expression Profiling Reveals 105 Putative Amplification Target Genes in Pancreatic Cancer

Por Mahlamäki, Eija H, Kauraniemi, Päivikki, Monni, Outi, Wolf, Maija, Hautaniemi, Sampsa, Kallioniemi, Anne
Publicado em 2004

Decision tree modeling predicts effects of inhibiting contractility signaling on cell motility

Por Kharait, Sourabh, Hautaniemi, Sampsa, Wu, Shan, Iwabu, Akihiro, Lauffenburger, Douglas A, Wells, Alan
Publicado em 2007

Novel Proteomics Strategy Brings Insight into the Prevalence of SUMO-2 Target Sites

Por Blomster, Henri A., Hietakangas, Ville, Wu, Jianmin, Kouvonen, Petri, Hautaniemi, Sampsa, Sistonen, Lea
Publicado em 2009