Using First Passage Statistics to Extract Environmentally Dependent Amino Acid Correlations

Por Greenbaum, Benjamin D., Kumar, Pradeep, Libchaber, Albert
Publicado em 2014

Sequence-specific Sensing of Nucleic Acids

Por Vabret, Nicolas, Bhardwaj, Nina, Greenbaum, Benjamin D.
Publicado no Trends Immunol (2016)

Patterns of Oligonucleotide Sequences in Viral and Host Cell RNA Identify Mediators of the Host Innate Immune System

Por Greenbaum, Benjamin D., Rabadan, Raul, Levine, Arnold J.
Publicado em 2009

P53 and the defenses against genome instability caused by transposons and repetitive elements

Por Levine, Arnold J., Ting, David T., Greenbaum, Benjamin D.
Publicado no Bioessays (2016)

Bird to Human Transmission Biases and Vaccine Escape Mutants in H5N1 Infections

Por Wagh, Kshitij, Bhatia, Aatish, Greenbaum, Benjamin D., Bhanot, Gyan
Publicado em 2014

Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses

Por Greenbaum, Benjamin D., Levine, Arnold J., Bhanot, Gyan, Rabadan, Raul
Publicado em 2008

Quantitative theory of entropic forces acting on constrained nucleotide sequences applied to viruses

Por Greenbaum, Benjamin D., Cocco, Simona, Levine, Arnold J., Monasson, Rémi
Publicado em 2014

Ion efflux and influenza infection trigger NLRP3 inflammasome signaling in human dendritic cells

Por Fernandez, Melissa Victoria, Miller, Elizabeth, Krammer, Florian, Gopal, Ramya, Greenbaum, Benjamin D., Bhardwaj, Nina
Publicado no J Leukoc Biol (2015)

Viral reassortment as an information exchange between viral segments

Por Greenbaum, Benjamin D., Li, Olive T. W., Poon, Leo L. M., Levine, Arnold J., Rabadan, Raul
Publicado em 2012

A statistical strategy to identify recombinant viral ribonucleoprotein of avian, human, and swine influenza A viruses with elevated polymerase activity

Por Chin, Alex W. H., Greenbaum, Benjamin D., Li, Olive T. W., Webby, Richard J., Poon, Leo L. M.
Publicado em 2013

Revelation of Influencing Factors in Overall Codon Usage Bias of Equine Influenza Viruses

Por Kumar, Naveen, Bera, Bidhan Chandra, Greenbaum, Benjamin D., Bhatia, Sandeep, Sood, Richa, Selvaraj, Pavulraj, Anand, Taruna, Tripathi, Bhupendra Nath, Virmani, Nitin
Publicado no PLoS One (2016)

Intrahost Dynamics of Antiviral Resistance in Influenza A Virus Reflect Complex Patterns of Segment Linkage, Reassortment, and Natural Selection

Por Rogers, Matthew B., Song, Timothy, Sebra, Robert, Greenbaum, Benjamin D., Hamelin, Marie-Eve, Fitch, Adam, Twaddle, Alan, Cui, Lijia, Holmes, Edward C., Boivin, Guy, Ghedin, Elodie
Publicado no mBio (2015)

Distinguishing the immunostimulatory properties of noncoding RNAs expressed in cancer cells

Por Tanne, Antoine, Muniz, Luciana R., Puzio-Kuter, Anna, Leonova, Katerina I., Gudkov, Andrei V., Ting, David T., Monasson, Rémi, Cocco, Simona, Levine, Arnold J., Bhardwaj, Nina, Greenbaum, Benjamin D.
Publicado no Proc Natl Acad Sci U S A (2015)

Diverse repetitive element RNA expression defines epigenetic and immunologic features of colon cancer

Por Desai, Niyati, Sajed, Dipti, Arora, Kshitij S., Solovyov, Alexander, Rajurkar, Mihir, Bledsoe, Jacob R., Sil, Srinjoy, Amri, Ramzi, Tai, Eric, MacKenzie, Olivia C., Mino-Kenudson, Mari, Aryee, Martin J., Ferrone, Cristina R., Berger, David L., Rivera, Miguel N., Greenbaum, Benjamin D., Deshpande, Vikram, Ting, David T.
Publicado no JCI Insight (2017)

Stage-specific human induced pluripotent stem cells map the progression of myeloid transformation to transplantable leukemia

Por Kotini, Andriana G, Chang, Chan-Jung, Chow, Arthur, Yuan, Han, Ho, Tzu-Chieh, Wang, Tiansu, Vora, Shailee, Solovyov, Alexander, Husser, Chrystel, Olszewska, Malgorzata, Teruya-Feldstein, Julie, Perumal, Deepak, Klimek, Virginia M, Spyridonidis, Alexandros, Rampal, Raajit K, Silverman, Lewis, Reddy, E Premkumar, Papaemmanuil, Elli, Parekh, Samir, Greenbaum, Benjamin D, Leslie, Christina S, Kharas, Michael G, Papapetrou, Eirini P
Publicado no Cell Stem Cell (2017)