Principles for Designing Synthetic Microbial Communities

door Johns, Nathan I., Blazejewski, Tomasz, Gomes, Antonio L.C., Wang, Harris H.
Gepubliceerd in Curr Opin Microbiol (2016)

Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction

door Gomes, Antonio L.C., Abeel, Thomas, Peterson, Matthew, Azizi, Elham, Lyubetskaya, Anna, Carvalho, Luís, Galagan, James
Gepubliceerd in 2014

Role of intragenic binding of cAMP responsive protein (CRP) in regulation of the succinate dehydrogenase genes Rv0249c-Rv0247c in TB complex mycobacteria

door Knapp, Gwendowlyn S., Lyubetskaya, Anna, Peterson, Matthew W., Gomes, Antonio L.C., Ma, Zhuo, Galagan, James E., McDonough, Kathleen A.
Gepubliceerd in Nucleic Acids Res (2015)

An alpha-defensin gene single nucleotide polymorphism modulates the gut microbiota and may alter the risk of acute graft-versus-host disease

door Rashidi, Armin, Herman, Adam, Gomes, Antonio LC, Peled, Jonathan U., Jenq, Robert R., Brereton, Daniel G., Staley, Christopher, Blazar, Bruce R., Weisdorf, Daniel J.
Gepubliceerd in Br J Haematol (2020)

Metagenomic mining of regulatory elements enables programmable species-selective gene expression

door Johns, Nathan I., Gomes, Antonio L.C., Yim, Sung Sun, Yang, Anthony, Blazejewski, Tomasz, Smillie, Christopher S., Smith, Mark B., Alm, Eric J., Kosuri, Sriram, Wang, Harris H.
Gepubliceerd in Nat Methods (2018)

Multiplex transcriptional characterizations across diverse bacterial species using cell‐free systems

door Yim, Sung Sun, Johns, Nathan I, Park, Jimin, Gomes, Antonio LC, McBee, Ross M, Richardson, Miles, Ronda, Carlotta, Chen, Sway P, Garenne, David, Noireaux, Vincent, Wang, Harris H
Gepubliceerd in Mol Syst Biol (2019)

Survival signal REG3α prevents crypt apoptosis to control acute gastrointestinal graft-versus-host disease

door Zhao, Dongchang, Kim, Yeung-Hyen, Jeong, Seihwan, Greenson, Joel K., Chaudhry, Mohammed S., Hoepting, Matthias, Anderson, Erik R., van den Brink, Marcel R.M., Peled, Jonathan U., Gomes, Antonio L.C., Slingerland, Ann E., Donovan, Michael J., Harris, Andrew C., Levine, John E., Ozbek, Umut, Hooper, Lora V., Stappenbeck, Thaddeus S., Ver Heul, Aaron, Liu, Ta-Chiang, Reddy, Pavan, Ferrara, James L.M.
Gepubliceerd in J Clin Invest (2018)

Chlorhexidine gluconate bathing reduces the incidence of bloodstream infections in adults undergoing inpatient hematopoietic cell transplantation

door Giri, Vinay K., Kegerreis, Kristin G., Ren, Yi, Bohannon, Lauren M., Lobaugh-Jin, Erica, Messina, Julia A., Matthews, Anita, Mowery, Yvonne M., Sito, Elizabeth, Lassiter, Martha, Saullo, Jennifer L., Jung, Sin-Ho, Ma, Li, Greenberg, Morris, Andermann, Tessa M., van den Brink, Marcel R.M., Peled, Jonathan U., Gomes, Antonio L.C., Choi, Taewoong, Gasparetto, Cristina J., Horwitz, Mitchell E., Long, Gwynn D., Lopez, Richard D., Rizzieri, David A., Sarantopoulos, Stefanie, Chao, Nelson J., Allen, Deborah H., Sung, Anthony D.
Gepubliceerd in Transplant Cell Ther (2021)