Mycobacterium tuberculosis resistance prediction and lineage classification from genome sequencing: comparison of automated analysis tools

por Schleusener, Viola, Köser, Claudio U., Beckert, Patrick, Niemann, Stefan, Feuerriegel, Silke
Publicado no Sci Rep (2017)

High Resolution Discrimination of Clinical Mycobacterium tuberculosis Complex Strains Based on Single Nucleotide Polymorphisms

por Homolka, Susanne, Projahn, Michaela, Feuerriegel, Silke, Ubben, Tanja, Diel, Roland, Nübel, Ulrich, Niemann, Stefan
Publicado em 2012

Importance of the Genetic Diversity within the Mycobacterium tuberculosis Complex for the Development of Novel Antibiotics and Diagnostic Tests of Drug Resistance

por Köser, Claudio U., Feuerriegel, Silke, Summers, David K., Archer, John A. C., Niemann, Stefan
Publicado em 2012

Genetic diversity within Mycobacterium tuberculosis complex impacts on the accuracy of genotypic pyrazinamide drug-susceptibility assay

por Köser, Claudio U., Comas, Iñaki, Feuerriegel, Silke, Niemann, Stefan, Gagneux, Sebastien, Peacock, Sharon J.
Publicado em 2014

Thr202Ala in thyA Is a Marker for the Latin American Mediterranean Lineage of the Mycobacterium tuberculosis Complex Rather than Para-Aminosalicylic Acid Resistance

por Feuerriegel, Silke, Köser, Claudio, Trübe, Leona, Archer, John, Rüsch Gerdes, Sabine, Richter, Elvira, Niemann, Stefan
Publicado em 2010

rplC T460C Identified as a Dominant Mutation in Linezolid-Resistant Mycobacterium tuberculosis Strains

por Beckert, Patrick, Hillemann, Doris, Kohl, Thomas A., Kalinowski, Jörn, Richter, Elvira, Niemann, Stefan, Feuerriegel, Silke
Publicado em 2012

Sequence Analyses of Just Four Genes To Detect Extensively Drug-Resistant Mycobacterium tuberculosis Strains in Multidrug-Resistant Tuberculosis Patients Undergoing Treatment

por Feuerriegel, Silke, Cox, Helen S., Zarkua, Nana, Karimovich, Hamraev A., Braker, Kai, Rüsch-Gerdes, Sabine, Niemann, Stefan
Publicado em 2009

Sequence analysis for detection of first-line drug resistance in Mycobacterium tuberculosis strains from a high-incidence setting

por Feuerriegel, Silke, Oberhauser, Barbara, George, Abu Garawani, Dafae, Foday, Richter, Elvira, Rüsch-Gerdes, Sabine, Niemann, Stefan
Publicado em 2012

Detection of low-frequency resistance-mediating SNPs in next-generation sequencing data of Mycobacterium tuberculosis complex strains with binoSNP

por Dreyer, Viola, Utpatel, Christian, Kohl, Thomas A., Barilar, Ivan, Gröschel, Matthias I., Feuerriegel, Silke, Niemann, Stefan
Publicado no Sci Rep (2020)

An application of competitive reporter monitored amplification (CMA) for rapid detection of single nucleotide polymorphisms (SNPs)

por Havlicek, Juliane, Rivera-Milla, Eric, Slickers, Peter, Andres, Sönke, Feuerriegel, Silke, Niemann, Stefan, Merker, Matthias, Labugger, Ines
Publicado no PLoS One (2017)

Rapid Microarray-Based Detection of Rifampin, Isoniazid, and Fluoroquinolone Resistance in Mycobacterium tuberculosis by Use of a Single Cartridge

por Havlicek, Juliane, Dachsel, Beatrice, Slickers, Peter, Andres, Sönke, Beckert, Patrick, Feuerriegel, Silke, Niemann, Stefan, Merker, Matthias, Labugger, Ines
Publicado no J Clin Microbiol (2018)

Rapid microarray-based assay for detection of pyrazinamide resistant Mycobacterium tuberculosis

por Havlicek, Juliane, Dachsel, Beatrice, Slickers, Peter, Andres, Sönke, Beckert, Patrick, Feuerriegel, Silke, Niemann, Stefan, Merker, Matthias, Labugger, Ines
Publicado no Diagn Microbiol Infect Dis (2019)

Comment on: Characterization of the embB gene in Mycobacterium tuberculosis isolates from Barcelona and rapid detection of main mutations related to ethambutol resistance using a l...

por Köser, Claudio U., Bryant, Josephine M., Comas, Iñaki, Feuerriegel, Silke, Niemann, Stefan, Gagneux, Sebastien, Parkhill, Julian, Peacock, Sharon J.
Publicado em 2014

PhyResSE: a Web Tool Delineating Mycobacterium tuberculosis Antibiotic Resistance and Lineage from Whole-Genome Sequencing Data

por Feuerriegel, Silke, Schleusener, Viola, Beckert, Patrick, Kohl, Thomas A., Miotto, Paolo, Cirillo, Daniela M., Cabibbe, Andrea M., Niemann, Stefan, Fellenberg, Kurt
Publicado no J Clin Microbiol (2015)

Impact of fgd1 and ddn Diversity in Mycobacterium tuberculosis Complex on In Vitro Susceptibility to PA-824

por Feuerriegel, Silke, Köser, Claudio U., Baù, Davide, Rüsch-Gerdes, Sabine, Summers, David K., Archer, John A. C., Marti-Renom, Marc A., Niemann, Stefan
Publicado em 2011

Lab-on-Chip-Based Platform for Fast Molecular Diagnosis of Multidrug-Resistant Tuberculosis

por Cabibbe, Andrea M., Miotto, Paolo, Moure, Raquel, Alcaide, Fernando, Feuerriegel, Silke, Pozzi, Gianni, Nikolayevskyy, Vladislav, Drobniewski, Francis, Niemann, Stefan, Reither, Klaus, Cirillo, Daniela M.
Publicado no J Clin Microbiol (2015)

Compensatory evolution drives multidrug-resistant tuberculosis in Central Asia

por Merker, Matthias, Barbier, Maxime, Cox, Helen, Rasigade, Jean-Philippe, Feuerriegel, Silke, Kohl, Thomas Andreas, Diel, Roland, Borrell, Sonia, Gagneux, Sebastien, Nikolayevskyy, Vladyslav, Andres, Sönke, Nübel, Ulrich, Supply, Philip, Wirth, Thierry, Niemann, Stefan
Publicado no eLife (2018)

Drug-resistance mechanisms and tuberculosis drugs

por Köser, Claudio U, Javid, Babak, Liddell, Kathleen, Ellington, Matthew J, Feuerriegel, Silke, Niemann, Stefan, Brown, Nicholas M, Burman, William J, Abubakar, Ibrahim, Ismail, Nazir A, Moore, David, Peacock, Sharon J, Török, M Estée
Publicado no Lancet (2015)

Revised Interpretation of the Hain Lifescience GenoType MTBC To Differentiate Mycobacterium canettii and Members of the Mycobacterium tuberculosis Complex

por Loiseau, Chloé, Brites, Daniela, Moser, Irmgard, Coll, Francesc, Pourcel, Christine, Robbe-Austerman, Suelee, Escuyer, Vincent, Musser, Kimberlee A., Peacock, Sharon J., Feuerriegel, Silke, Kohl, Thomas A., Niemann, Stefan, Gagneux, Sebastien, Köser, Claudio U.
Publicado no Antimicrob Agents Chemother (2019)

Mycobacterium tuberculosis Pyrazinamide Resistance Determinants: a Multicenter Study

por Miotto, Paolo, Cabibbe, Andrea M., Feuerriegel, Silke, Casali, Nicola, Drobniewski, Francis, Rodionova, Yulia, Bakonyte, Daiva, Stakenas, Petras, Pimkina, Edita, Augustynowicz-Kopeć, Ewa, Degano, Massimo, Ambrosi, Alessandro, Hoffner, Sven, Mansjö, Mikael, Werngren, Jim, Rüsch-Gerdes, Sabine, Niemann, Stefan, Cirillo, Daniela M.
Publicado em 2014