Prevalence of alternative splicing choices in Arabidopsis thaliana

Tekijä English, Adam C, Patel, Ketan S, Loraine, Ann E
Julkaistu 2010

PBHoney: identifying genomic variants via long-read discordance and interrupted mapping

Tekijä English, Adam C, Salerno, William J, Reid, Jeffrey G
Julkaistu 2014

Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing Technology

Tekijä English, Adam C., Richards, Stephen, Han, Yi, Wang, Min, Vee, Vanesa, Qu, Jiaxin, Qin, Xiang, Muzny, Donna M., Reid, Jeffrey G., Worley, Kim C., Gibbs, Richard A.
Julkaistu 2012

PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations

Tekijä Wang, Min, Beck, Christine R, English, Adam C, Meng, Qingchang, Buhay, Christian, Han, Yi, Doddapaneni, Harsha V, Yu, Fuli, Boerwinkle, Eric, Lupski, James R, Muzny, Donna M, Gibbs, Richard A
Julkaisussa BMC Genomics (2015)

SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads

Tekijä Hampton, Oliver A., English, Adam C., Wang, Mark, Salerno, William J., Liu, Yue, Muzny, Donna M., Han, Yi, Wheeler, David A., Worley, Kim C., Lupski, James R., Gibbs, Richard A.
Julkaisussa BMC Genomics (2017)

Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline

Tekijä Reid, Jeffrey G, Carroll, Andrew, Veeraraghavan, Narayanan, Dahdouli, Mahmoud, Sundquist, Andreas, English, Adam, Bainbridge, Matthew, White, Simon, Salerno, William, Buhay, Christian, Yu, Fuli, Muzny, Donna, Daly, Richard, Duyk, Geoff, Gibbs, Richard A, Boerwinkle, Eric
Julkaistu 2014

Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects

Tekijä Regier, Allison A., Farjoun, Yossi, Larson, David E., Krasheninina, Olga, Kang, Hyun Min, Howrigan, Daniel P., Chen, Bo-Juen, Kher, Manisha, Banks, Eric, Ames, Darren C., English, Adam C., Li, Heng, Xing, Jinchuan, Zhang, Yeting, Matise, Tara, Abecasis, Goncalo R., Salerno, Will, Zody, Michael C., Neale, Benjamin M., Hall, Ira M.
Julkaisussa Nat Commun (2018)

Megabase length hypermutation accompanies human structural variation at 17p11.2

Tekijä Beck, Christine R., Carvalho, Claudia M.B., Akdemir, Zeynep C., Sedlazeck, Fritz J., Song, Xiaofei, Meng, Qingchang, Hu, Jianhong, Doddapaneni, Harsha, Chong, Zechen, Chen, Edward S., Thornton, Philip C., Liu, Pengfei, Yuan, Bo, Withers, Marjorie, Jhangiani, Shalini N., Kalra, Divya, Walker, Kimberly, English, Adam C., Han, Yi, Chen, Ken, Muzny, Donna M., Ira, Grzegorz, Shaw, Chad A., Gibbs, Richard A., Hastings, P.J., Lupski, James R.
Julkaisussa Cell (2019)

Assessing structural variation in a personal genome—towards a human reference diploid genome

Tekijä English, Adam C, Salerno, William J, Hampton, Oliver A, Gonzaga-Jauregui, Claudia, Ambreth, Shruthi, Ritter, Deborah I, Beck, Christine R, Davis, Caleb F, Dahdouli, Mahmoud, Ma, Singer, Carroll, Andrew, Veeraraghavan, Narayanan, Bruestle, Jeremy, Drees, Becky, Hastie, Alex, Lam, Ernest T, White, Simon, Mishra, Pamela, Wang, Min, Han, Yi, Zhang, Feng, Stankiewicz, Pawel, Wheeler, David A, Reid, Jeffrey G, Muzny, Donna M, Rogers, Jeffrey, Sabo, Aniko, Worley, Kim C, Lupski, James R, Boerwinkle, Eric, Gibbs, Richard A
Julkaisussa BMC Genomics (2015)

Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host

Tekijä Palesch, David, Bosinger, Steven E., Tharp, Gregory K., Vanderford, Thomas H., Paiardini, Mirko, Chahroudi, Ann, Johnson, Zachary P., Kirchhoff, Frank, Hahn, Beatrice H., Norgren, Robert B., Patel, Nirav B., Sodora, Donald L., Dawoud, Reem A., Stewart, Caro-Beth, Seepo, Sara M., Harris, R. Alan, Liu, Yue, Raveendran, Muthuswamy, Han, Yi, English, Adam, Thomas, Gregg W. C., Hahn, Matthew W., Pipes, Lenore, Mason, Christopher E., Muzny, Donna M., Gibbs, Richard A., Sauter, Daniel, Worley, Kim, Rogers, Jeffrey, Silvestri, Guido
Julkaisussa Nature (2018)

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

Tekijä Saha, Surya, Hosmani, Prashant S, Villalobos-Ayala, Krystal, Miller, Sherry, Shippy, Teresa, Flores, Mirella, Rosendale, Andrew, Cordola, Chris, Bell, Tracey, Mann, Hannah, DeAvila, Gabe, DeAvila, Daniel, Moore, Zachary, Buller, Kyle, Ciolkevich, Kathryn, Nandyal, Samantha, Mahoney, Robert, Van Voorhis, Joshua, Dunlevy, Megan, Farrow, David, Hunter, David, Morgan, Taylar, Shore, Kayla, Guzman, Victoria, Izsak, Allison, Dixon, Danielle E, Cridge, Andrew, Cano, Liliana, Cao, Xiaolong, Jiang, Haobo, Leng, Nan, Johnson, Shannon, Cantarel, Brandi L, Richards, Stephen, English, Adam, Shatters, Robert G, Childers, Chris, Chen, Mei-Ju, Hunter, Wayne, Cilia, Michelle, Mueller, Lukas A, Munoz-Torres, Monica, Nelson, David, Poelchau, Monica F, Benoit, Joshua B, Wiersma-Koch, Helen, D’Elia, Tom, Brown, Susan J
Julkaisussa Database (Oxford) (2017)

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

Tekijä Saha, Surya, Hosmani, Prashant S, Villalobos-Ayala, Krystal, Miller, Sherry, Shippy, Teresa, Flores, Mirella, Rosendale, Andrew, Cordola, Chris, Bell, Tracey, Mann, Hannah, DeAvila, Gabe, DeAvila, Daniel, Moore, Zachary, Buller, Kyle, Ciolkevich, Kathryn, Nandyal, Samantha, Mahoney, Robert, Voorhis, Joshua Van, Dunlevy, Megan, Farrow, David, Hunter, David, Morgan, Taylar, Shore, Kayla, Guzman, Victoria, Izsak, Allison, Dixon, Danielle E, Cridge, Andrew, Cano, Liliana, Cao, Xiaolong, Jiang, Haobo, Leng, Nan, Johnson, Shannon, Cantarel, Brandi L, Richards, Stephen, English, Adam, Shatters, Robert G, Childers, Chris, Chen, Mei-Ju, Hunter, Wayne, Cilia, Michelle, Mueller, Lukas A, Munoz-Torres, Monica, Nelson, David, Poelchau, Monica F, Benoit, Joshua B, Wiersma-Koch, Helen, D'Elia, Tom, Brown, Susan J
Julkaisussa Database (Oxford) (2019)