Hepatitis C Virus NS5A Targets Nucleosome Assembly Protein NAP1L1 To Control the Innate Cellular Response

od Çevik, Recep Emrah, Cesarec, Mia, Da Silva Filipe, Ana, Licastro, Danilo, McLauchlan, John, Marcello, Alessandro
izdano v J Virol (2017)

Using noninvasive metagenomics to characterize viral communities from wildlife

od Bergner, Laura M., Orton, Richard J., da Silva Filipe, Ana, Shaw, Andrew E., Becker, Daniel J., Tello, Carlos, Biek, Roman, Streicker, Daniel G.
izdano v Mol Ecol Resour (2018)

Genome Sequences of Five African Swine Fever Virus Genotype IX Isolates from Domestic Pigs in Uganda

od Masembe, Charles, Sreenu, Vattipally B., Da Silva Filipe, Ana, Wilkie, Gavin S., Ogweng, Peter, Mayega, Francis Johnson, Muwanika, Vincent B., Biek, Roman, Palmarini, Massimo, Davison, Andrew J.
izdano v Microbiol Resour Announc (2018)

Development of a Reverse Genetics System for Toscana Virus (Lineage A)

od Alexander, Akira J. T., Confort, Marie-Pierre, Desloire, Sophie, Dunlop, James I., Kuchi, Srikeerthana, Sreenu, Vattipally B., Mair, Daniel, Wilkie, Gavin S., Da Silva Filipe, Ana, Brennan, Benjamin, Ratinier, Maxime, Arnaud, Frédérick, Kohl, Alain
izdano v Viruses (2020)

The histone chaperone HIRA promotes the induction of host innate immune defences in response to HSV-1 infection

od McFarlane, Steven, Orr, Anne, Roberts, Ashley P. E., Conn, Kristen L., Iliev, Victor, Loney, Colin, da Silva Filipe, Ana, Smollett, Katherine, Gu, Quan, Robertson, Neil, Adams, Peter D., Rai, Taranjit Singh, Boutell, Chris
izdano v PLoS Pathog (2019)

Interactions of Viral Proteins from Pathogenic and Low or Non-Pathogenic Orthohantaviruses with Human Type I Interferon Signaling

od Gallo, Giulia, Caignard, Grégory, Badonnel, Karine, Chevreux, Guillaume, Terrier, Samuel, Szemiel, Agnieszka, Roman-Sosa, Gleyder, Binder, Florian, Gu, Quan, Da Silva Filipe, Ana, Ulrich, Rainer G., Kohl, Alain, Vitour, Damien, Tordo, Noël, Ermonval, Myriam
izdano v Viruses (2021)

Convalescent plasma therapy for persistent hepatitis E virus infection

od Ankcorn, Michael, Gallacher, Jennifer, Ijaz, Samreen, Taha, Yusri, Harvala, Heli, Maclennan, Sheila, Thomson, Emma C., Davis, Chris, Singer, Joshua B., da Silva Filipe, Ana, Smollett, Katherine, Niebel, Marc, Semple, Malcolm G., Tedder, Richard S., McPherson, Stuart
izdano v J Hepatol (2019)

Zika Virus Infection Leads to Demyelination and Axonal Injury in Mature CNS Cultures

od Schultz, Verena, Cumberworth, Stephanie L., Gu, Quan, Johnson, Natasha, Donald, Claire L., McCanney, George A., Barrie, Jennifer A., Da Silva Filipe, Ana, Linington, Christopher, Willison, Hugh J., Edgar, Julia M., Barnett, Susan C., Kohl, Alain
izdano v Viruses (2021)

Amino Acid Substitutions in Genotype 3a Hepatitis C Virus Polymerase Protein Affect Responses to Sofosbuvir

od Wing, Peter A.C., Jones, Meleri, Cheung, Michelle, DaSilva, Sampath, Bamford, Connor, Jason Lee, Wing-Yiu, Aranday-Cortes, Elihu, Da Silva Filipe, Ana, McLauchlan, John, Smith, David, Irving, William, Cunningham, Morven, Ansari, Azim, Barnes, Eleanor, Foster, Graham R.
izdano v Gastroenterology (2019)

Development of reverse genetics systems and investigation of host response antagonism and reassortment potential for Cache Valley and Kairi viruses, two emerging orthobunyaviruses...

od Dunlop, James I., Szemiel, Agnieszka M., Navarro, Aitor, Wilkie, Gavin S., Tong, Lily, Modha, Sejal, Mair, Daniel, Sreenu, Vattipally B., Da Silva Filipe, Ana, Li, Ping, Huang, Yan-Jang S., Brennan, Benjamin, Hughes, Joseph, Vanlandingham, Dana L., Higgs, Stephen, Elliott, Richard M., Kohl, Alain
izdano v PLoS Negl Trop Dis (2018)

Interpreting Viral Deep Sequencing Data with GLUE

od Singer, Joshua B., Thomson, Emma C., Hughes, Joseph, Aranday-Cortes, Elihu, McLauchlan, John, da Silva Filipe, Ana, Tong, Lily, Manso, Carmen F., Gifford, Robert J., Robertson, David L., Barnes, Eleanor, Ansari, M. Azim, Mbisa, Jean L., Bibby, David F., Bradshaw, Daniel, Smith, David
izdano v Viruses (2019)

Detection of SARS‐CoV‐2 in respiratory samples from cats in the UK associated with human‐to‐cat transmission

od Hosie, Margaret J., Epifano, Ilaria, Herder, Vanessa, Orton, Richard J., Stevenson, Andrew, Johnson, Natasha, MacDonald, Emma, Dunbar, Dawn, McDonald, Michael, Howie, Fiona, Tennant, Bryn, Herrity, Darcy, Da Silva Filipe, Ana, Streicker, Daniel G., Willett, Brian J., Murcia, Pablo R., Jarrett, Ruth F., Robertson, David L., Weir, William
izdano v Vet Rec (2021)

Highly Diverse Hepatitis C Strains Detected in Sub‐Saharan Africa Have Unknown Susceptibility to Direct‐Acting Antiviral Treatments

od Davis, Chris, Mgomella, George S., da Silva Filipe, Ana, Frost, Eric H., Giroux, Genevieve, Hughes, Joseph, Hogan, Catherine, Kaleebu, Pontiano, Asiki, Gershim, McLauchlan, John, Niebel, Marc, Ocama, Ponsiano, Pomila, Cristina, Pybus, Oliver G., Pépin, Jacques, Simmonds, Peter, Singer, Joshua B., Sreenu, Vattipally B., Wekesa, Clara, Young, Elizabeth H., Murphy, Donald G., Sandhu, Manj, Thomson, Emma C.
izdano v Hepatology (2019)

Comparison of Next-Generation Sequencing Technologies for Comprehensive Assessment of Full-Length Hepatitis C Viral Genomes

od Thomson, Emma, Ip, Camilla L. C., Badhan, Anjna, Christiansen, Mette T., Adamson, Walt, Ansari, M. Azim, Bibby, David, Breuer, Judith, Brown, Anthony, Bowden, Rory, Bryant, Josie, Bonsall, David, Da Silva Filipe, Ana, Hinds, Chris, Hudson, Emma, Klenerman, Paul, Lythgow, Kieren, Mbisa, Jean L., McLauchlan, John, Myers, Richard, Piazza, Paolo, Roy, Sunando, Trebes, Amy, Sreenu, Vattipally B., Witteveldt, Jeroen, Barnes, Eleanor, Simmonds, Peter
izdano v J Clin Microbiol (2016)

Interferon lambda 4 impacts the genetic diversity of hepatitis C virus

od Ansari, M Azim, Aranday-Cortes, Elihu, Ip, Camilla LC, da Silva Filipe, Ana, Lau, Siu Hin, Bamford, Connor, Bonsall, David, Trebes, Amy, Piazza, Paolo, Sreenu, Vattipally, Cowton, Vanessa M, Hudson, Emma, Bowden, Rory, Patel, Arvind H, Foster, Graham R, Irving, William L, Agarwal, Kosh, Thomson, Emma C, Simmonds, Peter, Klenerman, Paul, Holmes, Chris, Barnes, Eleanor, Spencer, Chris CA, McLauchlan, John, Pedergnana, Vincent
izdano v eLife (2019)

Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil

od Donald, Claire L., Brennan, Benjamin, Cumberworth, Stephanie L., Rezelj, Veronica V., Clark, Jordan J., Cordeiro, Marli T., Freitas de Oliveira França, Rafael, Pena, Lindomar J., Wilkie, Gavin S., Da Silva Filipe, Ana, Davis, Christopher, Hughes, Joseph, Varjak, Margus, Selinger, Martin, Zuvanov, Luíza, Owsianka, Ania M., Patel, Arvind H., McLauchlan, John, Lindenbach, Brett D., Fall, Gamou, Sall, Amadou A., Biek, Roman, Rehwinkel, Jan, Schnettler, Esther, Kohl, Alain
izdano v PLoS Negl Trop Dis (2016)

Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity

od Volz, Erik, Hill, Verity, McCrone, John T., Price, Anna, Jorgensen, David, O’Toole, Áine, Southgate, Joel, Johnson, Robert, Jackson, Ben, Nascimento, Fabricia F., Rey, Sara M., Nicholls, Samuel M., Colquhoun, Rachel M., da Silva Filipe, Ana, Shepherd, James, Pascall, David J., Shah, Rajiv, Jesudason, Natasha, Li, Kathy, Jarrett, Ruth, Pacchiarini, Nicole, Bull, Matthew, Geidelberg, Lily, Siveroni, Igor, Goodfellow, Ian, Loman, Nicholas J., Pybus, Oliver G., Robertson, David L., Thomson, Emma C., Rambaut, Andrew, Connor, Thomas R.
izdano v Cell (2021)

SARS-CoV-2 within-host diversity and transmission

od Lythgoe, Katrina A., Hall, Matthew, Ferretti, Luca, de Cesare, Mariateresa, MacIntyre-Cockett, George, Trebes, Amy, Andersson, Monique, Otecko, Newton, Wise, Emma L., Moore, Nathan, Lynch, Jessica, Kidd, Stephen, Cortes, Nicholas, Mori, Matilde, Williams, Rebecca, Vernet, Gabrielle, Justice, Anita, Green, Angie, Nicholls, Samuel M., Ansari, M. Azim, Abeler-Drner, Lucie, Moore, Catrin E., Peto, Timothy E. A., Eyre, David W., Shaw, Robert, Simmonds, Peter, Buck, David, Todd, John A., Connor, Thomas R., Ashraf, Shirin, da Silva Filipe, Ana, Shepherd, James, Thomson, Emma C., Bonsall, David, Fraser, Christophe, Golubchik, Tanya
izdano v Science (2021)

Publisher Correction: Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland

od da Silva Filipe, Ana, Shepherd, James G., Williams, Thomas, Hughes, Joseph, Aranday-Cortes, Elihu, Asamaphan, Patawee, Ashraf, Shirin, Balcazar, Carlos, Brunker, Kirstyn, Campbell, Alasdair, Carmichael, Stephen, Davis, Chris, Dewar, Rebecca, Gallagher, Michael D., Gunson, Rory, Hill, Verity, Ho, Antonia, Jackson, Ben, James, Edward, Jesudason, Natasha, Johnson, Natasha, McWilliam Leitch, E. Carol, Li, Kathy, MacLean, Alasdair, Mair, Daniel, McAllister, David A., McCrone, John T., McDonald, Sarah E., McHugh, Martin P., Morris, A. Keith, Nichols, Jenna, Niebel, Marc, Nomikou, Kyriaki, Orton, Richard J., O’Toole, Áine, Palmarini, Massimo, Parcell, Benjamin J., Parr, Yasmin A., Rambaut, Andrew, Rooke, Stefan, Shaaban, Sharif, Shah, Rajiv, Singer, Joshua B., Smollett, Katherine, Starinskij, Igor, Tong, Lily, Sreenu, Vattipally B., Wastnedge, Elizabeth, Holden, Matthew T. G., Robertson, David L., Templeton, Kate, Thomson, Emma C.
izdano v Nat Microbiol (2021)

Author Correction: Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland

od da Silva Filipe, Ana, Shepherd, James G., Williams, Thomas, Hughes, Joseph, Aranday-Cortes, Elihu, Asamaphan, Patawee, Ashraf, Shirin, Balcazar, Carlos, Brunker, Kirstyn, Campbell, Alasdair, Carmichael, Stephen, Davis, Chris, Dewar, Rebecca, Gallagher, Michael D., Gunson, Rory, Hill, Verity, Ho, Antonia, Jackson, Ben, James, Edward, Jesudason, Natasha, Johnson, Natasha, McWilliam Leitch, E. Carol, Li, Kathy, MacLean, Alasdair, Mair, Daniel, McAllister, David A., McCrone, John T., McDonald, Sarah E., McHugh, Martin P., Morris, A. Keith, Nichols, Jenna, Niebel, Marc, Nomikou, Kyriaki, Orton, Richard J., O’Toole, Áine, Palmarini, Massimo, Parcell, Benjamin J., Parr, Yasmin A., Rambaut, Andrew, Rooke, Stefan, Shaaban, Sharif, Shah, Rajiv, Singer, Joshua B., Smollett, Katherine, Starinskij, Igor, Tong, Lily, Sreenu, Vattipally B., Wastnedge, Elizabeth, Holden, Matthew T. G., Robertson, David L., Templeton, Kate, Thomson, Emma C.
izdano v Nat Microbiol (2021)