Shape-IT: new rapid and accurate algorithm for haplotype inference

Por Delaneau, Olivier, Coulonges, Cédric, Zagury, Jean-François
Publicado em 2008

HLA-check: evaluating HLA data from SNP information

Por Jeanmougin, Marc, Noirel, Josselin, Coulonges, Cédric, Zagury, Jean-François
Publicado no BMC Bioinformatics (2017)

ISHAPE: new rapid and accurate software for haplotyping

Por Delaneau, Olivier, Coulonges, Cédric, Boelle, Pierre-Yves, Nelson, George, Spadoni, Jean-Louis, Zagury, Jean-François
Publicado em 2007

Computation of haplotypes on SNPs subsets: advantage of the "global method"

Por Coulonges, Cédric, Delaneau, Olivier, Girard, Manon, Do, Hervé, Adkins, Ronald, Spadoni, Jean-Louis, Zagury, Jean-François
Publicado em 2006

Identification of Genes Whose Expression Profile Is Associated with Non-Progression towards AIDS Using eQTLs

Por Spadoni, Jean-Louis, Rucart, Pierre, Le Clerc, Sigrid, van Manen, Daniëlle, Coulonges, Cédric, Ulveling, Damien, Laville, Vincent, Labib, Taoufik, Taing, Lieng, Delaneau, Olivier, Montes, Matthieu, Schuitemaker, Hanneke, Noirel, Josselin, Zagury, Jean-François
Publicado no PLoS One (2015)

Genome-Wide Association Study Identifies Single Nucleotide Polymorphism in DYRK1A Associated with Replication of HIV-1 in Monocyte-Derived Macrophages

Por Bol, Sebastiaan M., Moerland, Perry D., Limou, Sophie, van Remmerden, Yvonne, Coulonges, Cédric, van Manen, Daniëlle, Herbeck, Joshua T., Fellay, Jacques, Sieberer, Margit, Sietzema, Jantine G., van 't Slot, Ruben, Martinson, Jeremy, Zagury, Jean-François, Schuitemaker, Hanneke, van 't Wout, Angélique B.
Publicado em 2011

SCREENING LOW FREQUENCY SNPS FROM GENOME WIDE ASSOCIATION STUDY REVEALS A NEW RISK ALLELE FOR PROGRESSION TO AIDS

Por Le Clerc, Sigrid, Coulonges, Cédric, Delaneau, Olivier, Van Manen, Danielle, Herbeck, Joshua T., Limou, Sophie, An, Ping, Martinson, Jeremy J., Spadoni, Jean-Louis, Therwath, Amu, Veldink, Jan H., van den Berg, Leonard H., Taing, Lieng, Labib, Taoufik, Mellak, Safa, Montes, Matthieu, Delfraissy, Jean-François, Schächter, François, Winkler, Cheryl, Froguel, Philippe, Mullins, James I., Schuitemaker, Hanneke, Zagury, Jean-François
Publicado em 2011

Multicohort Genomewide Association Study Reveals a New Signal of Protection Against HIV-1 Acquisition

Por Limou, Sophie, Delaneau, Olivier, van Manen, Daniëlle, An, Ping, Sezgin, Efe, Le Clerc, Sigrid, Coulonges, Cédric, Troyer, Jennifer L., Veldink, Jan H., van den Berg, Leonard H., Spadoni, Jean-Louis, Taing, Lieng, Labib, Taoufik, Montes, Matthieu, Delfraissy, Jean-François, Schachter, François, O’Brien, Stephen J., Buchbinder, Susan, van Natta, Mark L., Jabs, Douglas A., Froguel, Philippe, Schuitemaker, Hanneke, Winkler, Cheryl A., Zagury, Jean-François
Publicado em 2012

Multiple-cohort genetic association study reveals CXCR6 as a new chemokine receptor involved in long-term nonprogression to AIDS

Por Limou, Sophie, Coulonges, Cédric, Herbeck, Joshua T., van Manen, Daniëlle, An, Ping, Le Clerc, Sigrid, Delaneau, Olivier, Diop, Gora, Taing, Lieng, Montes, Matthieu, van't Wout, Angélique B., Gottlieb, Geoffrey S., Therwath, Amu, Rouzioux, Christine, Delfraissy, Jean-François, Lelièvre, Jean-Daniel, Lévy, Yves, Hercberg, Serge, Dina, Christian, Phair, John, Donfield, Sharyne, Goedert, James J., Buchbinder, Susan, Estaquier, Jérôme, Schächter, François, Gut, Ivo, Froguel, Philippe, Mullins, James I., Schuitemaker, Hanneke, Winkler, Cheryl, Zagury, Jean-François
Publicado em 2010

Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load

Por McLaren, Paul J., Coulonges, Cedric, Bartha, István, Lenz, Tobias L., Deutsch, Aaron J., Bashirova, Arman, Buchbinder, Susan, Carrington, Mary N., Cossarizza, Andrea, Dalmau, Judith, De Luca, Andrea, Goedert, James J., Gurdasani, Deepti, Haas, David W., Herbeck, Joshua T., Johnson, Eric O., Kirk, Gregory D., Lambotte, Olivier, Luo, Ma, Mallal, Simon, van Manen, Daniëlle, Martinez-Picado, Javier, Meyer, Laurence, Miro, José M., Mullins, James I., Obel, Niels, Poli, Guido, Sandhu, Manjinder S., Schuitemaker, Hanneke, Shea, Patrick R., Theodorou, Ioannis, Walker, Bruce D., Weintrob, Amy C., Winkler, Cheryl A., Wolinsky, Steven M., Raychaudhuri, Soumya, Goldstein, David B., Telenti, Amalio, de Bakker, Paul I. W., Zagury, Jean-François, Fellay, Jacques
Publicado no Proc Natl Acad Sci U S A (2015)

Association Study of Common Genetic Variants and HIV-1 Acquisition in 6,300 Infected Cases and 7,200 Controls

Por McLaren, Paul J., Coulonges, Cédric, Ripke, Stephan, van den Berg, Leonard, Buchbinder, Susan, Carrington, Mary, Cossarizza, Andrea, Dalmau, Judith, Deeks, Steven G., Delaneau, Olivier, De Luca, Andrea, Goedert, James J., Haas, David, Herbeck, Joshua T., Kathiresan, Sekar, Kirk, Gregory D., Lambotte, Olivier, Luo, Ma, Mallal, Simon, van Manen, Daniëlle, Martinez-Picado, Javier, Meyer, Laurence, Miro, José M., Mullins, James I., Obel, Niels, O'Brien, Stephen J., Pereyra, Florencia, Plummer, Francis A., Poli, Guido, Qi, Ying, Rucart, Pierre, Sandhu, Manj S., Shea, Patrick R., Schuitemaker, Hanneke, Theodorou, Ioannis, Vannberg, Fredrik, Veldink, Jan, Walker, Bruce D., Weintrob, Amy, Winkler, Cheryl A., Wolinsky, Steven, Telenti, Amalio, Goldstein, David B., de Bakker, Paul I. W., Zagury, Jean-François, Fellay, Jacques
Publicado em 2013