Local Persistence of Novel MRSA Lineage after Hospital Ward Outbreak, Cambridge, UK, 2011–2013

od Toleman, Michelle S., Reuter, Sandra, Coll, Francesc, Harrison, Ewan M., Peacock, Sharon J.
izdano v Emerg Infect Dis (2016)

Feasibility of informing syndrome-level empiric antibiotic recommendations using publicly available antibiotic resistance datasets

od Leclerc, Quentin J., Naylor, Nichola R., Aiken, Alexander M., Coll, Francesc, Knight, Gwenan M.
izdano v Wellcome Open Res (2020)

Imputation-Based Population Genetics Analysis of Plasmodium falciparum Malaria Parasites

od Samad, Hanif, Coll, Francesc, Preston, Mark D., Ocholla, Harold, Fairhurst, Rick M., Clark, Taane G.
izdano v PLoS Genet (2015)

Ferric Citrate Regulator FecR Is Translocated across the Bacterial Inner Membrane via a Unique Twin-Arginine Transport-Dependent Mechanism

od Passmore, Ian J., Dow, Jennifer M., Coll, Francesc, Cuccui, Jon, Palmer, Tracy, Wren, Brendan W.
izdano v J Bacteriol (2020)

Genomic Surveillance of Methicillin-resistant Staphylococcus aureus: A Mathematical Early Modeling Study of Cost-effectiveness

od Dymond, Amy, Davies, Heather, Mealing, Stuart, Pollit, Vicki, Coll, Francesc, Brown, Nicholas M, Peacock, Sharon J
izdano v Clin Infect Dis (2020)

rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

od Wailan, Alexander M., Coll, Francesc, Heinz, Eva, Tonkin-Hill, Gerry, Corander, Jukka, Feasey, Nicholas A., Thomson, Nicholas R.
izdano v Microb Genom (2019)

Defining metrics for whole-genome sequence analysis of MRSA in clinical practice

od Raven, Kathy E., Blane, Beth, Kumar, Narender, Leek, Danielle, Bragin, Eugene, Coll, Francesc, Parkhill, Julian, Peacock, Sharon J.
izdano v Microb Genom (2020)

SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences

od Coll, Francesc, Mallard, Kim, Preston, Mark D., Bentley, Stephen, Parkhill, Julian, McNerney, Ruth, Martin, Nigel, Clark, Taane G.
Izdano 2012

Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England

od Harrison, Ewan M., Coll, Francesc, Toleman, Michelle S., Blane, Beth, Brown, Nicholas M., Török, M. Estee, Parkhill, Julian, Peacock, Sharon J.
izdano v Sci Rep (2017)

Systematic Surveillance Detects Multiple Silent Introductions and Household Transmission of Methicillin-Resistant Staphylococcus aureus USA300 in the East of England

od Toleman, Michelle S., Reuter, Sandra, Coll, Francesc, Harrison, Ewan M., Blane, Beth, Brown, Nicholas M., Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
izdano v J Infect Dis (2016)

Transient Silencing of Antibiotic Resistance by Mutation Represents a Significant Potential Source of Unanticipated Therapeutic Failure

od Kime, Louise, Randall, Christopher P., Banda, Frank I., Coll, Francesc, Wright, John, Richardson, Joseph, Empel, Joanna, Parkhill, Julian, O’Neill, Alex J.
izdano v mBio (2019)

Whole Genome Sequencing Based Characterization of Extensively Drug-Resistant Mycobacterium tuberculosis Isolates from Pakistan

od Ali, Asho, Hasan, Zahra, McNerney, Ruth, Mallard, Kim, Hill-Cawthorne, Grant, Coll, Francesc, Nair, Mridul, Pain, Arnab, Clark, Taane G., Hasan, Rumina
izdano v PLoS One (2015)

PhyTB: Phylogenetic tree visualisation and sample positioning for M. tuberculosis

od Benavente, Ernest D, Coll, Francesc, Furnham, Nick, McNerney, Ruth, Glynn, Judith R, Campino, Susana, Pain, Arnab, Mohareb, Fady R, Clark, Taane G
izdano v BMC Bioinformatics (2015)

Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing

od Raven, Kathy E., Gouliouris, Theodore, Brodrick, Hayley, Coll, Francesc, Brown, Nicholas M., Reynolds, Rosy, Reuter, Sandra, Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
izdano v Clin Infect Dis (2017)

A robust SNP barcode for typing Mycobacterium tuberculosis complex strains

od Coll, Francesc, McNerney, Ruth, Guerra-Assunção, José Afonso, Glynn, Judith R., Perdigão, João, Viveiros, Miguel, Portugal, Isabel, Pain, Arnab, Martin, Nigel, Clark, Taane G.
Izdano 2014

Assessing the sustainability of contrasting land use scenarios through the Socioecological Integrated Analysis (SIA) of the metropolitan green infrastructure in Barcelona

od Padró, Roc, La Rota-Aguilera, María José, Giocoli, Annalisa, Cirera, Jacob, Coll, Francesc, Pons, Manel, Pino, Joan, Pili, Silvia, Serrano, Tarik, Villalba, Gara, Marull, Joan
izdano v Landsc Urban Plan (2020)

Investigation of a Cluster of Sequence Type 22 Methicillin-Resistant Staphylococcus aureus Transmission in a Community Setting

od Toleman, Michelle S, Watkins, Emmeline R, Williams, Tom, Blane, Beth, Sadler, Belinda, Harrison, Ewan M, Coll, Francesc, Parkhill, Julian, Nazareth, Bernadette, Brown, Nicholas M, Peacock, Sharon J
izdano v Clin Infect Dis (2017)

Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis

od Coll, Francesc, Raven, Kathy E, Knight, Gwenan M, Blane, Beth, Harrison, Ewan M, Leek, Danielle, Enoch, David A, Brown, Nicholas M, Parkhill, Julian, Peacock, Sharon J
izdano v Lancet Microbe (2020)

Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events

od Jamrozy, Dorota, Coll, Francesc, Mather, Alison E., Harris, Simon R., Harrison, Ewan M., MacGowan, Alasdair, Karas, Andreas, Elston, Tony, Estée Török, M., Parkhill, Julian, Peacock, Sharon J.
izdano v BMC Genomics (2017)

Prospective genomic surveillance of methicillin-resistant Staphylococcus aureus (MRSA) associated with bloodstream infection, England, 1 October 2012 to 30 September 2013

od Toleman, Michelle S, Reuter, Sandra, Jamrozy, Dorota, Wilson, Hayley J, Blane, Beth, Harrison, Ewan M, Coll, Francesc, Hope, Russell J, Kearns, Angela, Parkhill, Julian, Peacock, Sharon J, Török, M Estée
izdano v Euro Surveill (2019)