The effects of multiple features of alternatively spliced exons on the K(A)/K(S )ratio test

nork Chen, Feng-Chi, Chuang, Trees-Juen
Argitaratua 2006

Different alternative splicing patterns are subject to opposite selection pressure for protein reading frame preservation

nork Chen, Feng-Chi, Chuang, Trees-Juen
Argitaratua 2007

DNA Methylation is Associated with an Increased Level of Conservation at Nondegenerate Nucleotides in Mammals

nork Chuang, Trees-Juen, Chen, Feng-Chi
Argitaratua 2014

Impacts of Pretranscriptional DNA Methylation, Transcriptional Transcription Factor, and Posttranscriptional microRNA Regulations on Protein Evolutionary Rate

nork Chuang, Trees-Juen, Chiang, Tai-Wei
Argitaratua 2014

NCLcomparator: systematically post-screening non-co-linear transcripts (circular, trans-spliced, or fusion RNAs) identified from various detectors

nork Chen, Chia-Ying, Chuang, Trees-Juen
Argitaratua izan da BMC Bioinformatics (2019)

Comment on "A comprehensive overview and evaluation of circular RNA detection tools"

nork Chen, Chia-Ying, Chuang, Trees-Juen
Argitaratua izan da PLoS Comput Biol (2019)

A-to-I RNA editing contributes to the persistence of predicted damaging mutations in populations

nork Mai, Te-Lun, Chuang, Trees-Juen
Argitaratua izan da Genome Res (2019)

Biogenesis, identification, and function of exonic circular RNAs

nork Chen, Iju, Chen, Chia‐Ying, Chuang, Trees‐Juen
Argitaratua izan da Wiley Interdiscip Rev RNA (2015)

INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events

nork Chen, Feng-Chi, Chen, Chueng-Jong, Chuang, Trees-Juen
Argitaratua 2007

CNVVdb: a database of copy number variations across vertebrate genomes

nork Chen, Feng-Chi, Chen, Yen-Zho, Chuang, Trees-Juen
Argitaratua 2009

Position-dependent correlations between DNA methylation and the evolutionary rates of mammalian coding exons

nork Chuang, Trees-Juen, Chen, Feng-Chi, Chen, Yen-Zho
Argitaratua 2012

A Novel Framework for the Identification and Analysis of Duplicons between Human and Chimpanzee

nork Chuang, Trees-Juen, Wu, Shian-Zu, Huang, Yao-Ting
Argitaratua 2013

The Relationships Among MicroRNA Regulation, Intrinsically Disordered Regions, and Other Indicators of Protein Evolutionary Rate

nork Chen, Sean Chun-Chang, Chuang, Trees-Juen, Li, Wen-Hsiung
Argitaratua 2011

Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat

nork Chen, Feng-Chi, Chen, Chuang-Jong, Ho, Jar-Yi, Chuang, Trees-Juen
Argitaratua 2006

Human-specific insertions and deletions inferred from mammalian genome sequences

nork Chen, Feng-Chi, Chen, Chueng-Jong, Li, Wen-Hsiung, Chuang, Trees-Juen
Argitaratua 2007

Scanning for the Signatures of Positive Selection for Human-Specific Insertions and Deletions

nork Chen, Chun-Hsi, Chuang, Trees-Juen, Liao, Ben-Yang, Chen, Feng-Chi
Argitaratua 2009

Gene Family Size Conservation Is a Good Indicator of Evolutionary Rates

nork Chen, Feng-Chi, Chen, Chiuan-Jung, Li, Wen-Hsiung, Chuang, Trees-Juen
Argitaratua 2010

The evolution of the coding exome of the Arabidopsis species - the influences of DNA methylation, relative exon position, and exon length

nork Chen, Feng-Chi, Chuang, Trees-Juen, Lin, Hsuan-Yu, Hsu, Min-Kung
Argitaratua 2014

Purifying selection shapes the coincident SNP distribution of primate coding sequences

nork Chen, Chia-Ying, Hung, Li-Yuan, Wu, Chan-Shuo, Chuang, Trees-Juen
Argitaratua izan da Sci Rep (2016)

Assessment of imprinting- and genetic variation-dependent monoallelic expression using reciprocal allele descendants between human family trios

nork Chuang, Trees-Juen, Tseng, Yu-Hsiang, Chen, Chia-Ying, Wang, Yi-Da
Argitaratua izan da Sci Rep (2017)