SVM(2): an improved paired-end-based tool for the detection of small genomic structural variations using high-throughput single-genome resequencing data

Por Chiara, Matteo, Pesole, Graziano, Horner, David S.
Publicado em 2012

De Novo Assembly of the Transcriptome of the Non-Model Plant Streptocarpus rexii Employing a Novel Heuristic to Recover Locus-Specific Transcript Clusters

Por Chiara, Matteo, Horner, David S., Spada, Alberto
Publicado em 2013

Large-scale detection and analysis of RNA editing in grape mtDNA by RNA deep-sequencing

Por Picardi, Ernesto, Horner, David S., Chiara, Matteo, Schiavon, Riccardo, Valle, Giorgio, Pesole, Graziano
Publicado em 2010

Role of the long non-coding RNA PVT1 in the dysregulation of the ceRNA-ceRNA network in human breast cancer

Por Conte, Federica, Fiscon, Giulia, Chiara, Matteo, Colombo, Teresa, Farina, Lorenzo, Paci, Paola
Publicado no PLoS One (2017)

Ploidy influences the functional attributes of de novo lager yeast hybrids

Por Krogerus, Kristoffer, Arvas, Mikko, De Chiara, Matteo, Magalhães, Frederico, Mattinen, Laura, Oja, Merja, Vidgren, Virve, Yue, Jia-Xing, Liti, Gianni, Gibson, Brian
Publicado no Appl Microbiol Biotechnol (2016)

Analysis of Two-Component Systems in Group B Streptococcus Shows That RgfAC and the Novel FspSR Modulate Virulence and Bacterial Fitness

Por Faralla, Cristina, Metruccio, Matteo M., De Chiara, Matteo, Mu, Rong, Patras, Kathryn A., Muzzi, Alessandro, Grandi, Guido, Margarit, Immaculada, Doran, Kelly S., Janulczyk, Robert
Publicado em 2014

Draft Genome Sequences of Six Listeria monocytogenes Strains Isolated from Dairy Products from a Processing Plant in Southern Italy

Por Chiara, Matteo, D’Erchia, Anna Maria, Manzari, Caterina, Minotto, Alice, Montagna, Cosimo, Addante, Nicoletta, Santagada, Gianfranco, Latorre, Laura, Pesole, Graziano, Horner, David S., Parisi, Antonio
Publicado em 2014

Whole-Genome Sequences of Nonencapsulated Haemophilus influenzae Strains Isolated in Italy

Por Giufrè, Maria, De Chiara, Matteo, Censini, Stefano, Guidotti, Silvia, Torricelli, Giulia, De Angelis, Gabriella, Cardines, Rita, Pizza, Mariagrazia, Muzzi, Alessandro, Cerquetti, Marina, Soriani, Marco
Publicado no Genome Announc (2015)

Genome sequencing of disease and carriage isolates of nontypeable Haemophilus influenzae identifies discrete population structure

Por De Chiara, Matteo, Hood, Derek, Muzzi, Alessandro, Pickard, Derek J., Perkins, Tim, Pizza, Mariagrazia, Dougan, Gordon, Rappuoli, Rino, Moxon, E. Richard, Soriani, Marco, Donati, Claudio
Publicado em 2014

Geographic Population Structure in Epstein-Barr Virus Revealed by Comparative Genomics

Por Chiara, Matteo, Manzari, Caterina, Lionetti, Claudia, Mechelli, Rosella, Anastasiadou, Eleni, Chiara Buscarinu, Maria, Ristori, Giovanni, Salvetti, Marco, Picardi, Ernesto, D’Erchia, Anna Maria, Pesole, Graziano, Horner, David S.
Publicado no Genome Biol Evol (2016)

Neisseria Adhesin A Variation and Revised Nomenclature Scheme

Por Bambini, Stefania, De Chiara, Matteo, Muzzi, Alessandro, Mora, Marirosa, Lucidarme, Jay, Brehony, Carina, Borrow, Ray, Masignani, Vega, Comanducci, Maurizio, Maiden, Martin C. J., Rappuoli, Rino, Pizza, Mariagrazia, Jolley, Keith A.
Publicado em 2014

Comparative Genomics of Listeria Sensu Lato: Genus-Wide Differences in Evolutionary Dynamics and the Progressive Gain of Complex, Potentially Pathogenicity-Related Traits through L...

Por Chiara, Matteo, Caruso, Marta, D’Erchia, Anna Maria, Manzari, Caterina, Fraccalvieri, Rosa, Goffredo, Elisa, Latorre, Laura, Miccolupo, Angela, Padalino, Iolanda, Santagada, Gianfranco, Chiocco, Doriano, Pesole, Graziano, Horner, David S., Parisi, Antonio
Publicado no Genome Biol Evol (2015)

Genomic Analysis Reveals the Molecular Basis for Capsule Loss in the Group B Streptococcus Population

Por Rosini, Roberto, Campisi, Edmondo, De Chiara, Matteo, Tettelin, Hervé, Rinaudo, Daniela, Toniolo, Chiara, Metruccio, Matteo, Guidotti, Silvia, Sørensen, Uffe B. Skov, Kilian, Mogens, Ramirez, Mario, Janulczyk, Robert, Donati, Claudio, Grandi, Guido, Margarit, Immaculada
Publicado no PLoS One (2015)

Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients

Por D'Argenio, Valeria, Casaburi, Giorgio, Precone, Vincenza, Pagliuca, Chiara, Colicchio, Roberta, Sarnataro, Daniela, Discepolo, Valentina, Kim, Sangman M, Russo, Ilaria, Del Vecchio Blanco, Giovanna, Horner, David S, Chiara, Matteo, Pesole, Graziano, Salvatore, Paola, Monteleone, Giovanni, Ciacci, Carolina, Caporaso, Gregory J, Jabrì, Bana, Salvatore, Francesco, Sacchetti, Lucia
Publicado no Am J Gastroenterol (2016)