BOMP: a program to predict integral β-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria

by Berven, Frode S., Flikka, Kristian, Jensen, Harald B., Eidhammer, Ingvar
Published 2004

Optimizing Performance of Glycopeptide Capture for Plasma Proteomics

by Berven, Frode S., Ahmad, Rushdy, Clauser, Karl R., Carr, Steven A.
Published 2010

Selecting Sample Preparation Workflows for Mass Spectrometry-Based Proteomic and Phosphoproteomic Analysis of Patient Samples with Acute Myeloid Leukemia

by Hernandez-Valladares, Maria, Aasebø, Elise, Selheim, Frode, Berven, Frode S., Bruserud, Øystein
Published in Proteomes (2016)

Biological characteristics of aging in human acute myeloid leukemia cells: the possible importance of aldehyde dehydrogenase, the cytoskeleton and altered transcriptional regulatio...

by Hernandez-Valladares, Maria, Aasebø, Elise, Berven, Frode, Selheim, Frode, Bruserud, Øystein
Published in Aging (Albany NY) (2020)

Global Cell Proteome Profiling, Phospho-signaling and Quantitative 
Proteomics for Identification of New Biomarkers in Acute Myeloid 
Leukemia Patients

by Aasebø, Elise, Forthun, Rakel B., Berven, Frode, Selheim, Frode, Hernandez-Valladares, Maria
Published in Curr Pharm Biotechnol (2016)

The Extracellular Bone Marrow Microenvironment—A Proteomic Comparison of Constitutive Protein Release by In Vitro Cultured Osteoblasts and Mesenchymal Stem Cells

by Aasebø, Elise, Birkeland, Even, Selheim, Frode, Berven, Frode, Brenner, Annette K., Bruserud, Øystein
Published in Cancers (Basel) (2020)

compomics-utilities: an open-source Java library for computational proteomics

by Barsnes, Harald, Vaudel, Marc, Colaert, Niklaas, Helsens, Kenny, Sickmann, Albert, Berven, Frode S, Martens, Lennart
Published 2011

Proteomic Profiling of Primary Human Acute Myeloid Leukemia Cells Does Not Reflect Their Constitutive Release of Soluble Mediators

by Aasebø, Elise, Hernandez-Valladares, Maria, Selheim, Frode, Berven, Frode S., Brenner, Annette K., Bruserud, Øystein
Published in Proteomes (2018)

Effects of Blood Contamination and the Rostro-Caudal Gradient on the Human Cerebrospinal Fluid Proteome

by Aasebø, Elise, Opsahl, Jill Anette, Bjørlykke, Yngvild, Myhr, Kjell-Morten, Kroksveen, Ann Cathrine, Berven, Frode S.
Published 2014

Reliable FASP-based procedures for optimal quantitative proteomic and phosphoproteomic analysis on samples from acute myeloid leukemia patients

by Hernandez-Valladares, Maria, Aasebø, Elise, Mjaavatten, Olav, Vaudel, Marc, Bruserud, Øystein, Berven, Frode, Selheim, Frode
Published in Biol Proced Online (2016)

Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism

by Yadetie, Fekadu, Bjørneklett, Silje, Garberg, Hilde Kristin, Oveland, Eystein, Berven, Frode, Goksøyr, Anders, Karlsen, Odd André
Published in BMC Genomics (2016)

Fast hyperbaric decompression after heliox saturation altered the brain proteome in rats

by Bjørkum, Alvhild Alette, Oveland, Eystein, Stuhr, Linda, Havnes, Marianne Bjordal, Berven, Frode, Grønning, Marit, Hope, Arvid
Published in PLoS One (2017)

The Progression of Acute Myeloid Leukemia from First Diagnosis to Chemoresistant Relapse: A Comparison of Proteomic and Phosphoproteomic Profiles

by Aasebø, Elise, Berven, Frode S., Hovland, Randi, Døskeland, Stein Ove, Bruserud, Øystein, Selheim, Frode, Hernandez-Valladares, Maria
Published in Cancers (Basel) (2020)

Development of robust targeted proteomics assays for cerebrospinal fluid biomarkers in multiple sclerosis

by Guldbrandsen, Astrid, Lereim, Ragnhild Reehorst, Jacobsen, Mari, Garberg, Hilde, Kroksveen, Ann Cathrine, Barsnes, Harald, Berven, Frode S.
Published in Clin Proteomics (2020)

Exploring the potential of public proteomics data

by Vaudel, Marc, Verheggen, Kenneth, Csordas, Attila, Ræder, Helge, Berven, Frode S., Martens, Lennart, Vizcaíno, Juan A., Barsnes, Harald
Published in Proteomics (2015)

The Surface-Associated and Secreted MopE Protein of Methylococcus capsulatus (Bath) Responds to Changes in the Concentration of Copper in the Growth Medium

by Karlsen, Odd A., Berven, Frode S., Stafford, Graham P., Larsen, Øivind, Murrell, J. Colin, Jensen, Harald B., Fjellbirkeland, Anne
Published 2003

The Brain Proteome of the Ubiquitin Ligase Peli1 Knock-Out Mouse during Experimental Autoimmune Encephalomyelitis

by Lereim, Ragnhild Reehorst, Oveland, Eystein, Xiao, Yichuan, Torkildsen, Øivind, Wergeland, Stig, Myhr, Kjell-Morten, Sun, Shao-Cong, Berven, Frode S
Published in J Proteomics Bioinform (2016)

Glomerular abundance of complement proteins characterized by proteomic analysis of laser-captured microdissected glomeruli associates with progressive disease in IgA nephropathy

by Paunas, Teodora Ioana Flavia, Finne, Kenneth, Leh, Sabine, Marti, Hans-Peter, Mollnes, Tom Eirik, Berven, Frode, Vikse, Bjørn Egil
Published in Clin Proteomics (2017)

The Capacity of Long-Term In Vitro Proliferation of Acute Myeloid Leukemia Cells Supported Only by Exogenous Cytokines Is Associated with a Patient Subset with Adverse Outcome

by Brenner, Annette K., Aasebø, Elise, Hernandez-Valladares, Maria, Selheim, Frode, Berven, Frode, Grønningsæter, Ida-Sofie, Bartaula-Brevik, Sushma, Bruserud, Øystein
Published in Cancers (Basel) (2019)

Characterization of glomerular extracellular matrix in IgA nephropathy by proteomic analysis of laser-captured microdissected glomeruli

by Paunas, Flavia Teodora Ioana, Finne, Kenneth, Leh, Sabine, Osman, Tarig Al-Hadi, Marti, Hans-Peter, Berven, Frode, Vikse, Bjørn Egil
Published in BMC Nephrol (2019)