Computational identification of cell-specific variable regions in ChIP-seq data

di Andreani, Tommaso, Albrecht, Steffen, Fontaine, Jean-Fred, Andrade-Navarro, Miguel A
Pubblicato in Nucleic Acids Res (2020)

Enteric infection induces Lark-mediated intron retention at the 5′ end of Drosophila genes

di Bou Sleiman, Maroun, Frochaux, Michael Vincent, Andreani, Tommaso, Osman, Dani, Guigo, Roderic, Deplancke, Bart
Pubblicato in Genome Biol (2020)

GADD45 promotes locus-specific DNA demethylation and 2C cycling in embryonic stem cells

di Schüle, Katrin M., Leichsenring, Manuel, Andreani, Tommaso, Vastolo, Viviana, Mallick, Medhavi, Musheev, Michael U., Karaulanov, Emil, Niehrs, Christof
Pubblicato in Genes Dev (2019)

cis-regulatory variation modulates susceptibility to enteric infection in the Drosophila genetic reference panel

di Frochaux, Michael V., Bou Sleiman, Maroun, Gardeux, Vincent, Dainese, Riccardo, Hollis, Brian, Litovchenko, Maria, Braman, Virginie S., Andreani, Tommaso, Osman, Dani, Deplancke, Bart
Pubblicato in Genome Biol (2020)

Assessment of computational methods for the analysis of single-cell ATAC-seq data

di Chen, Huidong, Lareau, Caleb, Andreani, Tommaso, Vinyard, Michael E., Garcia, Sara P., Clement, Kendell, Andrade-Navarro, Miguel A., Buenrostro, Jason D., Pinello, Luca
Pubblicato in Genome Biol (2019)

RNA Sequencing of Human Peripheral Blood Cells Indicates Upregulation of Immune-Related Genes in Huntington's Disease

di Andrade-Navarro, Miguel A., Mühlenberg, Katja, Spruth, Eike J., Mah, Nancy, González-López, Adrián, Andreani, Tommaso, Russ, Jenny, Huska, Matthew R., Muro, Enrique M., Fontaine, Jean-Fred, Amstislavskiy, Vyacheslav, Soldatov, Alexei, Nietfeld, Wilfried, Wanker, Erich E., Priller, Josef
Pubblicato in Front Neurol (2020)